Index A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z A AA_OPTO (aind_data_schema.models.organizations.Organization attribute) abbreviation (aind_data_schema.models.modalities.Behavior attribute) (aind_data_schema.models.modalities.BehaviorVideos attribute) (aind_data_schema.models.modalities.Confocal attribute) (aind_data_schema.models.modalities.Ecephys attribute) (aind_data_schema.models.modalities.Electromyography attribute) (aind_data_schema.models.modalities.Fib attribute) (aind_data_schema.models.modalities.Fmost attribute) (aind_data_schema.models.modalities.Icephys attribute) (aind_data_schema.models.modalities.Isi attribute) (aind_data_schema.models.modalities.Merfish attribute) (aind_data_schema.models.modalities.Mri attribute) (aind_data_schema.models.modalities.POphys attribute) (aind_data_schema.models.modalities.Slap attribute) (aind_data_schema.models.modalities.Spim attribute) (aind_data_schema.models.organizations.AAOptoElectronic attribute) (aind_data_schema.models.organizations.Abcam attribute) (aind_data_schema.models.organizations.AilipuTechnologyCo attribute) (aind_data_schema.models.organizations.AllenInstitute attribute) (aind_data_schema.models.organizations.AllenInstituteForBrainScience attribute) (aind_data_schema.models.organizations.AllenInstituteForNeuralDynamics attribute) (aind_data_schema.models.organizations.Allied attribute) (aind_data_schema.models.organizations.AmsOsram attribute) (aind_data_schema.models.organizations.AppliedScientificInstrumentation attribute) (aind_data_schema.models.organizations.ArecontVisionCostar attribute) (aind_data_schema.models.organizations.Asus attribute) (aind_data_schema.models.organizations.Basler attribute) (aind_data_schema.models.organizations.CambridgeTechnology attribute) (aind_data_schema.models.organizations.CarlZeiss attribute) (aind_data_schema.models.organizations.ChampalimaudFoundation attribute) (aind_data_schema.models.organizations.Chroma attribute) (aind_data_schema.models.organizations.CoherentScientific attribute) (aind_data_schema.models.organizations.ColumbiaUniversity attribute) (aind_data_schema.models.organizations.Computar attribute) (aind_data_schema.models.organizations.Conoptics attribute) (aind_data_schema.models.organizations.Custom attribute) (aind_data_schema.models.organizations.Dodotronic attribute) (aind_data_schema.models.organizations.Doric attribute) (aind_data_schema.models.organizations.Ealing attribute) (aind_data_schema.models.organizations.EdmundOptics attribute) (aind_data_schema.models.organizations.Euresys attribute) (aind_data_schema.models.organizations.Fujinon attribute) (aind_data_schema.models.organizations.Hamamatsu attribute) (aind_data_schema.models.organizations.Hamilton attribute) (aind_data_schema.models.organizations.HuazhongUniversityOfScienceAndTechnology attribute) (aind_data_schema.models.organizations.InfinityPhotoOptical attribute) (aind_data_schema.models.organizations.InteruniversityMicroelectronicsCenter attribute) (aind_data_schema.models.organizations.IRRobotCo attribute) (aind_data_schema.models.organizations.ISLProductsInternational attribute) (aind_data_schema.models.organizations.JacksonLaboratory attribute) (aind_data_schema.models.organizations.Julabo attribute) (aind_data_schema.models.organizations.Leica attribute) (aind_data_schema.models.organizations.Lg attribute) (aind_data_schema.models.organizations.LifeCanvas attribute) (aind_data_schema.models.organizations.MeadowlarkOptics attribute) (aind_data_schema.models.organizations.Mitutuyo attribute) (aind_data_schema.models.organizations.MKSNewport attribute) (aind_data_schema.models.organizations.Mpi attribute) (aind_data_schema.models.organizations.NationalInstituteOfNeurologicalDisordersAndStroke attribute) (aind_data_schema.models.organizations.NationalInstruments attribute) (aind_data_schema.models.organizations.Navitar attribute) (aind_data_schema.models.organizations.Neurophotometrics attribute) (aind_data_schema.models.organizations.NewScaleTechnologies attribute) (aind_data_schema.models.organizations.NewYorkUniversity attribute) (aind_data_schema.models.organizations.Nikon attribute) (aind_data_schema.models.organizations.NResearch attribute) (aind_data_schema.models.organizations.Olympus attribute) (aind_data_schema.models.organizations.OpenEphysProductionSite attribute) (aind_data_schema.models.organizations.Optotune attribute) (aind_data_schema.models.organizations.Other attribute) (aind_data_schema.models.organizations.Oxxius attribute) (aind_data_schema.models.organizations.Prizmatix attribute) (aind_data_schema.models.organizations.Quantifi attribute) (aind_data_schema.models.organizations.RaspberryPi attribute) (aind_data_schema.models.organizations.SchneiderKreuznach attribute) (aind_data_schema.models.organizations.SecondOrderEffects attribute) (aind_data_schema.models.organizations.Semrock attribute) (aind_data_schema.models.organizations.SigmaAldritch attribute) (aind_data_schema.models.organizations.SimonsFoundation attribute) (aind_data_schema.models.organizations.Spinnaker attribute) (aind_data_schema.models.organizations.Tamron attribute) (aind_data_schema.models.organizations.TeledyneFLIR attribute) (aind_data_schema.models.organizations.TheImagingSource attribute) (aind_data_schema.models.organizations.TheLeeCompany attribute) (aind_data_schema.models.organizations.Thermofisher attribute) (aind_data_schema.models.organizations.Thorlabs attribute) (aind_data_schema.models.organizations.TMC attribute) (aind_data_schema.models.organizations.Tymphany attribute) (aind_data_schema.models.organizations.Vieworks attribute) (aind_data_schema.models.organizations.Vortran attribute) (aind_data_schema.models.pid_names.BaseName attribute) (aind_data_schema.models.platforms.Behavior attribute) (aind_data_schema.models.platforms.Confocal attribute) (aind_data_schema.models.platforms.Ecephys attribute) (aind_data_schema.models.platforms.ExaSpim attribute) (aind_data_schema.models.platforms.Fip attribute) (aind_data_schema.models.platforms.Hcr attribute) (aind_data_schema.models.platforms.Hsfp attribute) (aind_data_schema.models.platforms.Isi attribute) (aind_data_schema.models.platforms.Merfish attribute) (aind_data_schema.models.platforms.MesoSpim attribute) (aind_data_schema.models.platforms.Mri attribute) (aind_data_schema.models.platforms.MultiplaneOphys attribute) (aind_data_schema.models.platforms.SingleplaneOphys attribute) (aind_data_schema.models.platforms.Slap2 attribute) (aind_data_schema.models.platforms.SmartSpim attribute) (aind_data_schema.models.registry.Addgene attribute) (aind_data_schema.models.registry.MouseGenomeInformatics attribute) (aind_data_schema.models.registry.NationalCenterForBiotechnologyInformation attribute) (aind_data_schema.models.registry.OpenResearcherAndContributorID attribute) (aind_data_schema.models.registry.ResearchOrganizationRegistry attribute) (aind_data_schema.models.registry.ResearchResourceIdentifiers attribute) ABCAM (aind_data_schema.models.organizations.Organization attribute) ACB (aind_data_schema.models.devices.ImmersionMedium attribute) acquisition (aind_data_schema.core.metadata.Metadata attribute) active_length (aind_data_schema.models.devices.FiberProbe attribute) active_mouse_platform (aind_data_schema.core.session.Session attribute) active_objectives (aind_data_schema.core.acquisition.Acquisition attribute) ADDGENE (aind_data_schema.models.registry.Registry attribute) addgene_id (aind_data_schema.core.procedures.ViralMaterial attribute) additional_device_names (aind_data_schema.imaging.tile.Channel attribute) additional_devices (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.rig.Rig attribute) additional_scan_parameters (aind_data_schema.core.mri_session.MRIScan attribute) additional_settings (aind_data_schema.models.devices.Device attribute) ADDITIVE (aind_data_schema.models.devices.BinMode attribute) affine_transform (aind_data_schema.models.coordinates.Affine3dTransform attribute) AGAROSE (aind_data_schema.core.procedures.ProtectiveMaterial attribute) AI (aind_data_schema.models.devices.DaqChannelType attribute) (aind_data_schema.models.organizations.Organization attribute) AIBS (aind_data_schema.models.organizations.Organization attribute) AILIPU (aind_data_schema.models.organizations.Organization attribute) AIND (aind_data_schema.models.organizations.Organization attribute) aind_data_schema module aind_data_schema.base module aind_data_schema.core module aind_data_schema.core.acquisition module aind_data_schema.core.data_description module aind_data_schema.core.instrument module aind_data_schema.core.metadata module aind_data_schema.core.mri_session module aind_data_schema.core.procedures module aind_data_schema.core.processing module aind_data_schema.core.rig module aind_data_schema.core.session module aind_data_schema.core.subject module aind_data_schema.imaging module aind_data_schema.imaging.tile module aind_data_schema.models module aind_data_schema.models.coordinates module aind_data_schema.models.devices module aind_data_schema.models.harp_types module aind_data_schema.models.modalities module aind_data_schema.models.organizations module aind_data_schema.models.pid_names module aind_data_schema.models.platforms module aind_data_schema.models.process_names module aind_data_schema.models.reagent module aind_data_schema.models.registry module aind_data_schema.models.species module aind_data_schema.models.stimulus module aind_data_schema.models.units module aind_data_schema.utils module aind_data_schema.utils.diagrams module aind_data_schema.utils.json_writer module aind_data_schema.utils.schema_version_bump module AIR (aind_data_schema.models.devices.Cooling attribute) (aind_data_schema.models.devices.ImmersionMedium attribute) air_filtration (aind_data_schema.models.devices.Enclosure attribute) ALEXA_405 (aind_data_schema.core.procedures.Fluorophore attribute) ALEXA_488 (aind_data_schema.core.procedures.Fluorophore attribute) ALEXA_546 (aind_data_schema.core.procedures.Fluorophore attribute) ALEXA_568 (aind_data_schema.core.procedures.Fluorophore attribute) ALEXA_594 (aind_data_schema.core.procedures.Fluorophore attribute) ALEXA_633 (aind_data_schema.core.procedures.Fluorophore attribute) ALEXA_647 (aind_data_schema.core.procedures.Fluorophore attribute) alleles (aind_data_schema.core.subject.Subject attribute) ALLIED (aind_data_schema.models.organizations.Organization attribute) alternating_current (aind_data_schema.core.procedures.IontophoresisInjection attribute) amplitude_modulation_frequency (aind_data_schema.models.stimulus.AuditoryStimulation attribute) anaesthesia (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.Surgery attribute) analyses (aind_data_schema.core.processing.Processing attribute) ANALYSIS (aind_data_schema.models.process_names.ProcessName attribute) analysis_name (aind_data_schema.core.data_description.AnalysisDescription attribute) analyst_full_name (aind_data_schema.core.processing.AnalysisProcess attribute) ANALYZED (aind_data_schema.core.data_description.DataRegex attribute) AnatomicalDirection (class in aind_data_schema.models.coordinates) angle (aind_data_schema.core.procedures.OphysProbe attribute) angle_unit (aind_data_schema.core.procedures.OphysProbe attribute) (aind_data_schema.core.session.DomeModule attribute) AngleUnit (class in aind_data_schema.models.units) animal_weight_post (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.Surgery attribute) (aind_data_schema.core.session.Session attribute) animal_weight_prior (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.Surgery attribute) (aind_data_schema.core.session.Session attribute) antibodies (aind_data_schema.core.procedures.SpecimenProcedure attribute) AO (aind_data_schema.models.devices.DaqChannelType attribute) AP (aind_data_schema.models.coordinates.AnatomicalDirection attribute) ap (aind_data_schema.models.coordinates.CcfCoords attribute) arc_angle (aind_data_schema.core.session.DomeModule attribute) (aind_data_schema.models.coordinates.ModuleOrientation2d attribute) (aind_data_schema.models.coordinates.ModuleOrientation3d attribute) ASI (aind_data_schema.models.organizations.Organization attribute) assembly_name (aind_data_schema.core.session.DomeModule attribute) ASUS (aind_data_schema.models.organizations.Organization attribute) ATTO_488 (aind_data_schema.core.procedures.Fluorophore attribute) ATTO_565 (aind_data_schema.core.procedures.Fluorophore attribute) ATTO_643 (aind_data_schema.core.procedures.Fluorophore attribute) AUDITORY (aind_data_schema.core.session.StimulusModality attribute) AVCOSTAR (aind_data_schema.models.organizations.Organization attribute) AVERAGE (aind_data_schema.models.devices.BinMode attribute) axes (aind_data_schema.core.acquisition.Acquisition attribute) AxisName (class in aind_data_schema.models.coordinates) B background_strain (aind_data_schema.core.subject.Subject attribute) BackgroundStrain (class in aind_data_schema.core.subject) BALB_c (aind_data_schema.core.subject.BackgroundStrain attribute) BANDPASS (aind_data_schema.models.devices.FilterType attribute) bandpass_filter_type (aind_data_schema.models.stimulus.AuditoryStimulation attribute) bandpass_high_frequency (aind_data_schema.models.stimulus.AuditoryStimulation attribute) bandpass_low_frequency (aind_data_schema.models.stimulus.AuditoryStimulation attribute) bandpass_order (aind_data_schema.models.stimulus.AuditoryStimulation attribute) baseline_duration (aind_data_schema.models.stimulus.OptoStimulation attribute) baseline_duration_unit (aind_data_schema.models.stimulus.OptoStimulation attribute) baseline_weight (aind_data_schema.core.procedures.WaterRestriction attribute) basestation_firmware_version (aind_data_schema.models.devices.NeuropixelsBasestation attribute) BASLER (aind_data_schema.models.organizations.Organization attribute) BEAM_EXPANDER (aind_data_schema.models.devices.ImagingDeviceType attribute) BEHAVIOR (aind_data_schema.core.data_description.Group attribute) (aind_data_schema.models.harp_types.HarpDeviceType attribute) (aind_data_schema.models.modalities.Modality attribute) (aind_data_schema.models.platforms.Platform attribute) BEHAVIOR_VIDEOS (aind_data_schema.models.modalities.Modality attribute) bin_height (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) bin_mode (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) bin_unit (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) bin_width (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) BinMode (class in aind_data_schema.models.devices) bit_depth (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) BODY (aind_data_schema.models.devices.CameraTarget attribute) BOTTOM (aind_data_schema.models.devices.CameraTarget attribute) BRAIN_SURFACE (aind_data_schema.models.devices.CameraTarget attribute) brake_output (aind_data_schema.models.devices.Wheel attribute) BRANCH (aind_data_schema.core.session.SlapSessionType attribute) breeding_group (aind_data_schema.core.subject.BreedingInfo attribute) breeding_info (aind_data_schema.core.subject.Subject attribute) BREGMA (aind_data_schema.core.procedures.CoordinateReferenceLocation attribute) (aind_data_schema.models.coordinates.Origin attribute) bregma_to_lambda_distance (aind_data_schema.core.procedures.BrainInjection attribute) (aind_data_schema.core.procedures.Craniotomy attribute) (aind_data_schema.core.procedures.OphysProbe attribute) bregma_to_lambda_unit (aind_data_schema.core.procedures.BrainInjection attribute) (aind_data_schema.core.procedures.Craniotomy attribute) (aind_data_schema.core.procedures.OphysProbe attribute) brightness (aind_data_schema.models.devices.Monitor attribute) bsc_firmware_version (aind_data_schema.models.devices.NeuropixelsBasestation attribute) build_data_name() (in module aind_data_schema.core.data_description) build_name() (aind_data_schema.core.data_description.AnalysisDescription method) (aind_data_schema.core.data_description.DataDescription method) (aind_data_schema.core.data_description.DerivedDataDescription method) (aind_data_schema.core.data_description.RawDataDescription method) BUTTERWORTH (aind_data_schema.models.stimulus.FilterType attribute) BW (aind_data_schema.models.devices.CameraChroma attribute) C C (aind_data_schema.models.units.TemperatureUnit attribute) C57BL_6J (aind_data_schema.core.subject.BackgroundStrain attribute) cage_id (aind_data_schema.core.subject.Housing attribute) calibration_data (aind_data_schema.core.instrument.Instrument attribute) calibration_date (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.session.DomeModule attribute) (aind_data_schema.models.devices.Calibration attribute) calibrations (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.rig.Rig attribute) (aind_data_schema.core.session.Session attribute) CALLITHRIX_JACCHUS (aind_data_schema.models.species.Species attribute) CAMBRIDGE_TECHNOLOGY (aind_data_schema.models.organizations.Organization attribute) camera (aind_data_schema.models.devices.CameraAssembly attribute) CAMERA (aind_data_schema.models.devices.DetectorType attribute) CAMERA_CONTROLLER (aind_data_schema.models.harp_types.HarpDeviceType attribute) camera_names (aind_data_schema.core.session.Stream attribute) camera_target (aind_data_schema.models.devices.CameraAssembly attribute) CameraChroma (class in aind_data_schema.models.devices) CAMERALINK (aind_data_schema.models.devices.DataInterface attribute) cameras (aind_data_schema.core.rig.Rig attribute) CameraTarget (class in aind_data_schema.models.devices) CAPACITIVE (aind_data_schema.models.devices.LickSensorType attribute) CARRIER (aind_data_schema.models.devices.ChannelType attribute) ccf_coordinate_transform (aind_data_schema.core.rig.Rig attribute) ccf_version (aind_data_schema.models.coordinates.CcfCoords attribute) CCFv3 (aind_data_schema.models.coordinates.CcfVersion attribute) CcfVersion (class in aind_data_schema.models.coordinates) CENTER (aind_data_schema.models.devices.SpoutSide attribute) center_wavelength (aind_data_schema.models.devices.Filter attribute) CERAMIC (aind_data_schema.models.devices.FerruleMaterial attribute) chamber_immersion (aind_data_schema.core.acquisition.Acquisition attribute) CHAMPALIMAUD (aind_data_schema.models.organizations.Organization attribute) channel (aind_data_schema.imaging.tile.AcquisitionTile attribute) channel_index (aind_data_schema.models.devices.DAQChannel attribute) (aind_data_schema.models.devices.OlfactometerChannel attribute) (aind_data_schema.models.stimulus.OlfactometerChannelConfig attribute) channel_name (aind_data_schema.core.acquisition.ProcessingSteps attribute) (aind_data_schema.imaging.tile.Channel attribute) (aind_data_schema.models.devices.DAQChannel attribute) channel_type (aind_data_schema.models.devices.DAQChannel attribute) (aind_data_schema.models.devices.OlfactometerChannel attribute) channels (aind_data_schema.core.session.Stack attribute) (aind_data_schema.models.devices.DAQDevice attribute) (aind_data_schema.models.devices.Olfactometer attribute) (aind_data_schema.models.stimulus.OlfactoryStimulation attribute) ChannelType (class in aind_data_schema.models.devices) check_dv_and_vol_list_lengths() (aind_data_schema.core.procedures.NanojectInjection class method) check_output_id_length() (aind_data_schema.core.procedures.Sectioning class method) chroma (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) CHROMA (aind_data_schema.models.organizations.Organization attribute) CLEARING (aind_data_schema.core.procedures.SpecimenProcedureType attribute) CLOCK_SYNCHRONIZER (aind_data_schema.models.harp_types.HarpDeviceType attribute) CM (aind_data_schema.models.units.SizeUnit attribute) COAX (aind_data_schema.models.devices.DataInterface attribute) code_url (aind_data_schema.core.processing.DataProcess attribute) code_version (aind_data_schema.core.processing.DataProcess attribute) codebook_name (aind_data_schema.core.procedures.HCRSeries attribute) CODEOCEAN (aind_data_schema.core.metadata.ExternalPlatforms attribute) COHERENT_SCIENTIFIC (aind_data_schema.models.organizations.Organization attribute) cohoused_subjects (aind_data_schema.core.subject.Housing attribute) COLOR (aind_data_schema.models.devices.CameraChroma attribute) COLUMBIA (aind_data_schema.models.organizations.Organization attribute) com_port (aind_data_schema.core.instrument.Com attribute) com_ports (aind_data_schema.core.instrument.Instrument attribute) COMPRESSION (aind_data_schema.models.process_names.ProcessName attribute) COMPUTAR (aind_data_schema.models.organizations.Organization attribute) computer_name (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.DAQDevice attribute) (aind_data_schema.models.devices.Detector attribute) concentration (aind_data_schema.core.procedures.NonViralMaterial attribute) (aind_data_schema.core.procedures.Stain attribute) concentration_unit (aind_data_schema.core.procedures.NonViralMaterial attribute) ConcentrationUnit (class in aind_data_schema.models.units) CONFOCAL (aind_data_schema.models.devices.ImagingInstrumentType attribute) (aind_data_schema.models.modalities.Modality attribute) (aind_data_schema.models.platforms.Platform attribute) CONJUGATE (aind_data_schema.core.procedures.ImmunolabelClass attribute) CONOPTICS (aind_data_schema.models.organizations.Organization attribute) contrast (aind_data_schema.models.devices.Monitor attribute) cooling (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) Cooling (class in aind_data_schema.models.devices) coordinate_transform (aind_data_schema.core.session.DomeModule attribute) coordinate_transformations (aind_data_schema.imaging.tile.Tile attribute) CoordinateReferenceLocation (class in aind_data_schema.core.procedures) core_diameter (aind_data_schema.models.devices.FiberProbe attribute) (aind_data_schema.models.devices.Patch attribute) core_diameter_unit (aind_data_schema.models.devices.FiberProbe attribute) core_version (aind_data_schema.models.devices.HarpDevice attribute) CORONAL (aind_data_schema.core.procedures.SectionOrientation attribute) coupled_fov_index (aind_data_schema.core.session.FieldOfView attribute) coupling (aind_data_schema.models.devices.Laser attribute) Coupling (class in aind_data_schema.models.devices) coupling_efficiency (aind_data_schema.models.devices.Laser attribute) coupling_efficiency_unit (aind_data_schema.models.devices.Laser attribute) craniotomy_hemisphere (aind_data_schema.core.procedures.Craniotomy attribute) craniotomy_type (aind_data_schema.core.procedures.Craniotomy attribute) CraniotomyType (class in aind_data_schema.core.procedures) create_unit_with_value() (in module aind_data_schema.models.units) created (aind_data_schema.core.metadata.Metadata attribute) creation_time (aind_data_schema.core.data_description.DataDescription attribute) crop_height (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) crop_unit (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) crop_width (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) CRUDE (aind_data_schema.core.procedures.VirusPrepType attribute) CurrentUnit (class in aind_data_schema.models.units) CUSTOM (aind_data_schema.models.organizations.Organization attribute) cut_off_wavelength (aind_data_schema.models.devices.Filter attribute) cut_on_wavelength (aind_data_schema.models.devices.Filter attribute) CUTTLEFISH (aind_data_schema.models.harp_types.HarpDeviceType attribute) CY3 (aind_data_schema.core.procedures.Fluorophore attribute) D DAQ_DEVICE_MANUFACTURERS (aind_data_schema.models.organizations.Organization attribute) daq_names (aind_data_schema.core.session.Stream attribute) DaqChannelType (class in aind_data_schema.models.devices) daqs (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.rig.Rig attribute) DATA (aind_data_schema.core.data_description.DataRegex attribute) data_description (aind_data_schema.core.metadata.Metadata attribute) data_interface (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.DAQDevice attribute) (aind_data_schema.models.devices.Detector attribute) (aind_data_schema.models.devices.HarpDevice attribute) (aind_data_schema.models.devices.NeuropixelsBasestation attribute) (aind_data_schema.models.devices.OpenEphysAcquisitionBoard attribute) data_level (aind_data_schema.core.data_description.AnalysisDescription attribute) (aind_data_schema.core.data_description.DataDescription attribute) (aind_data_schema.core.data_description.DerivedDataDescription attribute) (aind_data_schema.core.data_description.RawDataDescription attribute) data_processes (aind_data_schema.core.processing.PipelineProcess attribute) data_streams (aind_data_schema.core.session.Session attribute) data_summary (aind_data_schema.core.data_description.DataDescription attribute) DataInterface (class in aind_data_schema.models.devices) DataLevel (class in aind_data_schema.core.data_description) DataRegex (class in aind_data_schema.core.data_description) DATE (aind_data_schema.core.data_description.RegexParts attribute) date (aind_data_schema.core.subject.WellnessReport attribute) date_of_birth (aind_data_schema.core.subject.Subject attribute) date_surface_replaced (aind_data_schema.models.devices.MousePlatform attribute) datetime_from_name_string() (in module aind_data_schema.core.data_description) datetime_to_name_string() (in module aind_data_schema.core.data_description) DB (aind_data_schema.models.units.SoundIntensityUnit attribute) decoder (aind_data_schema.models.devices.Disc attribute) DEFAULT_FILE_PATH (aind_data_schema.utils.json_writer.SchemaWriter attribute) default_filename() (aind_data_schema.base.AindCoreModel class method) DEG (aind_data_schema.models.units.AngleUnit attribute) DELIPIDATION (aind_data_schema.core.procedures.SpecimenProcedureType attribute) DENOISING (aind_data_schema.models.process_names.ProcessName attribute) depth_unit (aind_data_schema.core.session.StackChannel attribute) DERIVED (aind_data_schema.core.data_description.DataLevel attribute) (aind_data_schema.core.data_description.DataRegex attribute) describedBy (aind_data_schema.base.AindCoreModel attribute) (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.data_description.DataDescription attribute) (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.metadata.Metadata attribute) (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.Procedures attribute) (aind_data_schema.core.processing.Processing attribute) (aind_data_schema.core.rig.Rig attribute) (aind_data_schema.core.session.Session attribute) (aind_data_schema.core.subject.Subject attribute) description (aind_data_schema.core.procedures.OtherSubjectProcedure attribute) (aind_data_schema.core.processing.AnalysisProcess attribute) (aind_data_schema.imaging.tile.Channel attribute) (aind_data_schema.models.devices.Calibration attribute) (aind_data_schema.models.devices.Filter attribute) (aind_data_schema.models.devices.Maintenance attribute) DETECTION_AXIS (aind_data_schema.models.devices.StageAxisDirection attribute) DETECTOR_MANUFACTURERS (aind_data_schema.models.organizations.Organization attribute) detector_name (aind_data_schema.imaging.tile.Channel attribute) detector_type (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) detectors (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.rig.Rig attribute) (aind_data_schema.core.session.Stream attribute) DetectorType (class in aind_data_schema.models.devices) device_axes (aind_data_schema.models.coordinates.RelativePosition attribute) device_name (aind_data_schema.models.devices.Calibration attribute) (aind_data_schema.models.devices.DAQChannel attribute) (aind_data_schema.models.devices.Maintenance attribute) device_origin (aind_data_schema.models.coordinates.RelativePosition attribute) device_position_transformations (aind_data_schema.models.coordinates.RelativePosition attribute) device_type (aind_data_schema.core.session.LaserConfig attribute) (aind_data_schema.core.session.LightEmittingDiodeConfig attribute) (aind_data_schema.models.devices.AdditionalImagingDevice attribute) (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.DAQDevice attribute) (aind_data_schema.models.devices.Detector attribute) (aind_data_schema.models.devices.Device attribute) (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) (aind_data_schema.models.devices.Disc attribute) (aind_data_schema.models.devices.Enclosure attribute) (aind_data_schema.models.devices.EphysProbe attribute) (aind_data_schema.models.devices.FiberProbe attribute) (aind_data_schema.models.devices.Filter attribute) (aind_data_schema.models.devices.HarpDevice attribute) (aind_data_schema.models.devices.Headstage attribute) (aind_data_schema.models.devices.Lamp attribute) (aind_data_schema.models.devices.Laser attribute) (aind_data_schema.models.devices.Lens attribute) (aind_data_schema.models.devices.LightEmittingDiode attribute) (aind_data_schema.models.devices.Manipulator attribute) (aind_data_schema.models.devices.Monitor attribute) (aind_data_schema.models.devices.MotorizedStage attribute) (aind_data_schema.models.devices.MousePlatform attribute) (aind_data_schema.models.devices.NeuropixelsBasestation attribute) (aind_data_schema.models.devices.Objective attribute) (aind_data_schema.models.devices.Olfactometer attribute) (aind_data_schema.models.devices.OpenEphysAcquisitionBoard attribute) (aind_data_schema.models.devices.OpticalTable attribute) (aind_data_schema.models.devices.Patch attribute) (aind_data_schema.models.devices.PockelsCell attribute) (aind_data_schema.models.devices.PolygonalScanner attribute) (aind_data_schema.models.devices.RewardDelivery attribute) (aind_data_schema.models.devices.RewardSpout attribute) (aind_data_schema.models.devices.Scanner attribute) (aind_data_schema.models.devices.Speaker attribute) (aind_data_schema.models.devices.Treadmill attribute) (aind_data_schema.models.devices.Tube attribute) (aind_data_schema.models.devices.Wheel attribute) DeviceDriver (class in aind_data_schema.models.devices) DFF_ESTIMATION (aind_data_schema.models.process_names.ProcessName attribute) DHC (aind_data_schema.core.procedures.CraniotomyType attribute) DI (aind_data_schema.models.devices.DaqChannelType attribute) diameter (aind_data_schema.models.devices.Filter attribute) (aind_data_schema.models.devices.Tube attribute) diameter_unit (aind_data_schema.models.devices.Tube attribute) DICHROIC (aind_data_schema.models.devices.FilterType attribute) DIFFUSER (aind_data_schema.models.devices.ImagingDeviceType attribute) digital_micromirror_devices (aind_data_schema.core.rig.Rig attribute) dilation (aind_data_schema.imaging.tile.Channel attribute) dilation_unit (aind_data_schema.core.session.SlapFieldOfView attribute) (aind_data_schema.imaging.tile.Channel attribute) dimension (aind_data_schema.models.coordinates.ImageAxis attribute) direction (aind_data_schema.models.coordinates.Axis attribute) (aind_data_schema.models.coordinates.ImageAxis attribute) DISPIM (aind_data_schema.models.devices.ImagingInstrumentType attribute) dmd_curtain (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) dmd_curtain_unit (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) dmd_dilation_x (aind_data_schema.core.session.SlapFieldOfView attribute) dmd_dilation_y (aind_data_schema.core.session.SlapFieldOfView attribute) dmd_flip (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) DO (aind_data_schema.models.devices.DaqChannelType attribute) DODOTRONIC (aind_data_schema.models.organizations.Organization attribute) DORIC (aind_data_schema.models.organizations.Organization attribute) double_bounce_design (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) driver (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) driver_version (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) dura_removed (aind_data_schema.core.procedures.Craniotomy attribute) DURAGEL (aind_data_schema.core.procedures.ProtectiveMaterial attribute) duration (aind_data_schema.core.procedures.Anaesthetic attribute) duration_unit (aind_data_schema.core.procedures.Anaesthetic attribute) dv (aind_data_schema.models.coordinates.CcfCoords attribute) E EALING (aind_data_schema.models.organizations.Organization attribute) EASYINDEX (aind_data_schema.models.devices.ImmersionMedium attribute) ECEPHYS (aind_data_schema.models.devices.ImagingInstrumentType attribute) (aind_data_schema.models.modalities.Modality attribute) (aind_data_schema.models.platforms.Platform attribute) echo_time (aind_data_schema.core.mri_session.MRIScan attribute) echo_time_unit (aind_data_schema.core.mri_session.MRIScan attribute) ECI (aind_data_schema.models.devices.ImmersionMedium attribute) EDMUND_OPTICS (aind_data_schema.models.organizations.Organization attribute) effective_echo_time (aind_data_schema.core.mri_session.MRIScan attribute) EMBEDDING (aind_data_schema.core.procedures.SpecimenProcedureType attribute) EMG (aind_data_schema.models.modalities.Modality attribute) enclosure (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.rig.Rig attribute) encoder (aind_data_schema.models.devices.Disc attribute) (aind_data_schema.models.devices.Wheel attribute) encoder_firmware (aind_data_schema.models.devices.Disc attribute) encoder_output (aind_data_schema.models.devices.Wheel attribute) end_date (aind_data_schema.core.procedures.SpecimenProcedure attribute) (aind_data_schema.core.procedures.TrainingProtocol attribute) (aind_data_schema.core.procedures.WaterRestriction attribute) end_date_time (aind_data_schema.core.processing.DataProcess attribute) end_depth (aind_data_schema.core.session.StackChannel attribute) end_time (aind_data_schema.core.procedures.HybridizationChainReaction attribute) EPHYS (aind_data_schema.core.data_description.Group attribute) ephys_assemblies (aind_data_schema.core.rig.Rig attribute) EPHYS_CURATION (aind_data_schema.models.process_names.ProcessName attribute) ephys_modules (aind_data_schema.core.session.Stream attribute) EPHYS_POSTPROCESSING (aind_data_schema.models.process_names.ProcessName attribute) EPHYS_PREPROCESSING (aind_data_schema.models.process_names.ProcessName attribute) ephys_probes (aind_data_schema.core.session.EphysModule attribute) EPHYS_VISUALIZATION (aind_data_schema.models.process_names.ProcessName attribute) ETH (aind_data_schema.models.devices.DataInterface attribute) EURESYS (aind_data_schema.models.organizations.Organization attribute) event_based_sampling (aind_data_schema.models.devices.DAQChannel attribute) EXASPIM (aind_data_schema.models.devices.ImagingInstrumentType attribute) (aind_data_schema.models.platforms.Platform attribute) excitation_power (aind_data_schema.core.session.LaserConfig attribute) (aind_data_schema.core.session.LightEmittingDiodeConfig attribute) (aind_data_schema.imaging.tile.Channel attribute) excitation_power_unit (aind_data_schema.core.session.LaserConfig attribute) (aind_data_schema.core.session.LightEmittingDiodeConfig attribute) (aind_data_schema.imaging.tile.Channel attribute) excitation_wavelength (aind_data_schema.core.procedures.Readout attribute) (aind_data_schema.imaging.tile.Channel attribute) excitation_wavelength_unit (aind_data_schema.core.procedures.Readout attribute) (aind_data_schema.imaging.tile.Channel attribute) experimenter_full_name (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.SpecimenProcedure attribute) (aind_data_schema.core.procedures.Surgery attribute) (aind_data_schema.core.session.Session attribute) expiration_date (aind_data_schema.models.reagent.Reagent attribute) exposure_time (aind_data_schema.core.session.DetectorConfig attribute) exposure_time_unit (aind_data_schema.core.session.DetectorConfig attribute) EXTERNAL (aind_data_schema.core.session.TriggerType attribute) external_links (aind_data_schema.core.metadata.Metadata attribute) external_material (aind_data_schema.models.devices.Enclosure attribute) external_storage_directory (aind_data_schema.core.acquisition.Acquisition attribute) ExternalPlatforms (class in aind_data_schema.core.metadata) EYE (aind_data_schema.models.devices.CameraTarget attribute) F FACE_BOTTOM (aind_data_schema.models.devices.CameraTarget attribute) FACE_FORWARD (aind_data_schema.models.devices.CameraTarget attribute) FACE_SIDE (aind_data_schema.models.devices.CameraTarget attribute) FC (aind_data_schema.models.units.UnitlessUnit attribute) FEMALE (aind_data_schema.core.subject.Sex attribute) ferrule_material (aind_data_schema.models.devices.FiberProbe attribute) FerruleMaterial (class in aind_data_schema.models.devices) FIB (aind_data_schema.models.modalities.Modality attribute) fiber_assemblies (aind_data_schema.core.rig.Rig attribute) fiber_connections (aind_data_schema.core.session.FiberModule attribute) (aind_data_schema.core.session.Stream attribute) fiber_modules (aind_data_schema.core.session.Stream attribute) fiber_name (aind_data_schema.core.session.FiberConnectionConfig attribute) fibers (aind_data_schema.models.devices.FiberAssembly attribute) FIDUCIAL_SEGMENTATION (aind_data_schema.models.process_names.ProcessName attribute) FILE_CONVERSION (aind_data_schema.models.process_names.ProcessName attribute) file_name (aind_data_schema.imaging.tile.Tile attribute) FILL (aind_data_schema.core.procedures.StainType attribute) filter (aind_data_schema.models.devices.CameraAssembly attribute) FILTER_MANUFACTURERS (aind_data_schema.models.organizations.Organization attribute) filter_names (aind_data_schema.imaging.tile.Channel attribute) FILTER_SIZE_25 (aind_data_schema.models.devices.FilterSize attribute) FILTER_SIZE_32 (aind_data_schema.models.devices.FilterSize attribute) filter_type (aind_data_schema.models.devices.Filter attribute) filter_wheel_index (aind_data_schema.imaging.tile.Channel attribute) (aind_data_schema.models.devices.Filter attribute) filters (aind_data_schema.core.rig.Rig attribute) FilterSize (class in aind_data_schema.models.devices) FilterType (class in aind_data_schema.models.devices) (class in aind_data_schema.models.stimulus) FIP (aind_data_schema.models.platforms.Platform attribute) firmware (aind_data_schema.models.devices.MotorizedStage attribute) firmware_version (aind_data_schema.models.devices.DAQDevice attribute) FIVE_MM (aind_data_schema.core.procedures.CraniotomyType attribute) FIXATION (aind_data_schema.core.procedures.SpecimenProcedureType attribute) FIXATION_PERMEABILIZATION (aind_data_schema.core.procedures.SpecimenProcedureType attribute) fixed_pulse_train_interval (aind_data_schema.models.stimulus.OptoStimulation attribute) FLIR (aind_data_schema.models.organizations.Organization attribute) flow_capacity (aind_data_schema.models.devices.OlfactometerChannel attribute) flow_unit (aind_data_schema.models.devices.OlfactometerChannel attribute) FLUORESCENCE_EVENT_DETECTION (aind_data_schema.models.process_names.ProcessName attribute) fluorescence_filters (aind_data_schema.core.instrument.Instrument attribute) fluorophore (aind_data_schema.core.procedures.Antibody attribute) (aind_data_schema.core.procedures.Readout attribute) Fluorophore (class in aind_data_schema.core.procedures) FMOST (aind_data_schema.models.modalities.Modality attribute) focal_length (aind_data_schema.models.devices.Lens attribute) focal_length_unit (aind_data_schema.models.devices.Lens attribute) fov_coordinate_ap (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) fov_coordinate_ml (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) fov_coordinate_unit (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) fov_height (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) fov_reference (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) fov_scale_factor (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) fov_scale_factor_unit (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) fov_size_unit (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) fov_width (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) frame_rate (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) frame_rate_unit (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) FRED_HUTCH (aind_data_schema.models.devices.ScannerLocation attribute) FREE_SPACE (aind_data_schema.models.devices.Coupling attribute) frequency_unit (aind_data_schema.models.stimulus.AuditoryStimulation attribute) FrequencyUnit (class in aind_data_schema.models.units) from_abbreviation() (aind_data_schema.models.modalities.Modality class method) (aind_data_schema.models.organizations.Organization class method) (aind_data_schema.models.platforms.Platform class method) from_data_description() (aind_data_schema.core.data_description.DerivedDataDescription class method) from_direction_code() (aind_data_schema.core.acquisition.Acquisition class method) from_name() (aind_data_schema.models.organizations.Organization class method) FUJINON (aind_data_schema.models.organizations.Organization attribute) fundee (aind_data_schema.core.data_description.Funding attribute) funder (aind_data_schema.core.data_description.Funding attribute) FUNDERS (aind_data_schema.models.organizations.Organization attribute) funding_source (aind_data_schema.core.data_description.DataDescription attribute) G G (aind_data_schema.models.units.MassUnit attribute) gain (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) GALVO (aind_data_schema.models.devices.ImagingDeviceType attribute) GELATION (aind_data_schema.core.procedures.SpecimenProcedureType attribute) gene (aind_data_schema.core.procedures.OligoProbe attribute) GENERIC_HARP_DEVICE (aind_data_schema.models.harp_types.HarpDeviceType attribute) genotype (aind_data_schema.core.subject.Subject attribute) get_schemas() (aind_data_schema.utils.json_writer.SchemaWriter static method) grant_number (aind_data_schema.core.data_description.Funding attribute) ground_wire_diameter (aind_data_schema.core.procedures.ProtectiveMaterialReplacement attribute) ground_wire_diameter_unit (aind_data_schema.core.procedures.ProtectiveMaterialReplacement attribute) ground_wire_hole (aind_data_schema.core.procedures.ProtectiveMaterialReplacement attribute) ground_wire_material (aind_data_schema.core.procedures.ProtectiveMaterialReplacement attribute) grounded (aind_data_schema.models.devices.Enclosure attribute) GroundWireMaterial (class in aind_data_schema.core.procedures) group (aind_data_schema.core.data_description.DataDescription attribute) Group (class in aind_data_schema.core.data_description) group_index (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) groups (aind_data_schema.models.stimulus.PhotoStimulation attribute) H HAMAMATSU (aind_data_schema.models.organizations.Organization attribute) HAMILTON (aind_data_schema.models.organizations.Organization attribute) hardware_name (aind_data_schema.core.instrument.Com attribute) hardware_version (aind_data_schema.models.devices.DAQDevice attribute) harp_device_type (aind_data_schema.models.devices.HarpDevice attribute) (aind_data_schema.models.devices.Olfactometer attribute) HarpDeviceType (class in aind_data_schema.models.harp_types) HCR (aind_data_schema.core.procedures.SpecimenProcedureType attribute) (aind_data_schema.models.platforms.Platform attribute) HCR_probes (aind_data_schema.core.procedures.HybridizationChainReaction attribute) hcr_rounds (aind_data_schema.core.procedures.HCRSeries attribute) hcr_series (aind_data_schema.core.procedures.SpecimenProcedure attribute) headframe_material (aind_data_schema.core.procedures.Headframe attribute) headframe_part_number (aind_data_schema.core.procedures.Headframe attribute) headframe_type (aind_data_schema.core.procedures.Headframe attribute) HeadframeMaterial (class in aind_data_schema.core.procedures) headstage (aind_data_schema.models.devices.EphysProbe attribute) height (aind_data_schema.models.coordinates.Size2d attribute) (aind_data_schema.models.coordinates.Size3d attribute) (aind_data_schema.models.devices.Filter attribute) (aind_data_schema.models.devices.Monitor attribute) HEMI (aind_data_schema.core.procedures.SectionStrategy attribute) home_cage_enrichment (aind_data_schema.core.subject.Housing attribute) HomeCageEnrichment (class in aind_data_schema.core.subject) HOMO_SAPIENS (aind_data_schema.models.species.Species attribute) housing (aind_data_schema.core.subject.Subject attribute) HR (aind_data_schema.models.units.TimeUnit attribute) HSFP (aind_data_schema.models.platforms.Platform attribute) humidity_control (aind_data_schema.core.instrument.Instrument attribute) HUST (aind_data_schema.models.organizations.Organization attribute) HYBRIDIZATION_AMPLIFICATION (aind_data_schema.core.procedures.SpecimenProcedureType attribute) HZ (aind_data_schema.models.units.FrequencyUnit attribute) I iacuc_protocol (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.Surgery attribute) (aind_data_schema.core.procedures.WaterRestriction attribute) (aind_data_schema.core.session.Session attribute) ICEPHYS (aind_data_schema.models.modalities.Modality attribute) id (aind_data_schema.core.metadata.Metadata attribute) ILLUMINATION_AXIS (aind_data_schema.models.devices.StageAxisDirection attribute) IMAGE_ATLAS_ALIGNMENT (aind_data_schema.models.process_names.ProcessName attribute) IMAGE_BACKGROUND_SUBTRACTION (aind_data_schema.models.process_names.ProcessName attribute) IMAGE_CELL_QUANTIFICATION (aind_data_schema.models.process_names.ProcessName attribute) IMAGE_CELL_SEGMENTATION (aind_data_schema.models.process_names.ProcessName attribute) IMAGE_DESTRIPING (aind_data_schema.models.process_names.ProcessName attribute) IMAGE_FLATFIELD_CORRECTION (aind_data_schema.models.process_names.ProcessName attribute) IMAGE_IMPORTING (aind_data_schema.models.process_names.ProcessName attribute) IMAGE_THRESHOLDING (aind_data_schema.models.process_names.ProcessName attribute) IMAGE_TILE_ALIGNMENT (aind_data_schema.models.process_names.ProcessName attribute) IMAGE_TILE_FUSING (aind_data_schema.models.process_names.ProcessName attribute) IMAGE_TILE_PROJECTION (aind_data_schema.models.process_names.ProcessName attribute) imaging_angle (aind_data_schema.imaging.tile.AcquisitionTile attribute) imaging_angle_unit (aind_data_schema.imaging.tile.AcquisitionTile attribute) imaging_depth (aind_data_schema.core.session.FieldOfView attribute) imaging_depth_unit (aind_data_schema.core.session.FieldOfView attribute) imaging_device_type (aind_data_schema.models.devices.AdditionalImagingDevice attribute) IMAGING_SOURCE (aind_data_schema.models.organizations.Organization attribute) ImagingDeviceType (class in aind_data_schema.models.devices) ImagingInstrumentType (class in aind_data_schema.models.devices) IMEC (aind_data_schema.models.organizations.Organization attribute) immersion (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) (aind_data_schema.models.devices.Objective attribute) ImmersionMedium (class in aind_data_schema.models.devices) immunolabel_class (aind_data_schema.core.procedures.Antibody attribute) ImmunolabelClass (class in aind_data_schema.core.procedures) IMMUNOLABELING (aind_data_schema.core.procedures.SpecimenProcedureType attribute) implant_hole_number (aind_data_schema.core.session.ManipulatorModule attribute) implant_part_number (aind_data_schema.core.procedures.Craniotomy attribute) IN (aind_data_schema.models.units.SizeUnit attribute) index (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.models.devices.ProbePort attribute) INFINITY_PHOTO_OPTICAL (aind_data_schema.models.organizations.Organization attribute) initiator_name (aind_data_schema.core.procedures.HCRProbe attribute) (aind_data_schema.core.procedures.HCRReadout attribute) injection_angle (aind_data_schema.core.procedures.BrainInjection attribute) injection_angle_unit (aind_data_schema.core.procedures.BrainInjection attribute) injection_coordinate_ap (aind_data_schema.core.procedures.BrainInjection attribute) injection_coordinate_depth (aind_data_schema.core.procedures.BrainInjection attribute) injection_coordinate_ml (aind_data_schema.core.procedures.BrainInjection attribute) injection_coordinate_reference (aind_data_schema.core.procedures.BrainInjection attribute) injection_coordinate_unit (aind_data_schema.core.procedures.BrainInjection attribute) injection_current (aind_data_schema.core.procedures.IontophoresisInjection attribute) injection_current_unit (aind_data_schema.core.procedures.IontophoresisInjection attribute) injection_duration (aind_data_schema.core.procedures.Injection attribute) injection_duration_unit (aind_data_schema.core.procedures.Injection attribute) injection_eye (aind_data_schema.core.procedures.RetroOrbitalInjection attribute) injection_hemisphere (aind_data_schema.core.procedures.BrainInjection attribute) injection_materials (aind_data_schema.core.procedures.Injection attribute) injection_volume (aind_data_schema.core.procedures.IntraCerebellarVentricleInjection attribute) (aind_data_schema.core.procedures.IntraCisternalMagnaInjection attribute) (aind_data_schema.core.procedures.IntraperitonealInjection attribute) (aind_data_schema.core.procedures.NanojectInjection attribute) (aind_data_schema.core.procedures.RetroOrbitalInjection attribute) injection_volume_unit (aind_data_schema.core.procedures.IntraCerebellarVentricleInjection attribute) (aind_data_schema.core.procedures.IntraCisternalMagnaInjection attribute) (aind_data_schema.core.procedures.IntraperitonealInjection attribute) (aind_data_schema.core.procedures.NanojectInjection attribute) (aind_data_schema.core.procedures.RetroOrbitalInjection attribute) input (aind_data_schema.models.devices.Calibration attribute) input_data_name (aind_data_schema.core.data_description.DerivedDataDescription attribute) INPUT_EXPANDER (aind_data_schema.models.harp_types.HarpDeviceType attribute) input_location (aind_data_schema.core.processing.DataProcess attribute) institution (aind_data_schema.core.data_description.DataDescription attribute) instrument (aind_data_schema.core.metadata.Metadata attribute) instrument_id (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.procedures.HybridizationChainReaction attribute) (aind_data_schema.core.procedures.Injection attribute) instrument_type (aind_data_schema.core.instrument.Instrument attribute) INTER (aind_data_schema.core.processing.RegistrationType attribute) inter_spiral_interval (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) inter_spiral_interval_unit (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) inter_trial_interval (aind_data_schema.models.stimulus.PhotoStimulation attribute) inter_trial_interval_unit (aind_data_schema.models.stimulus.PhotoStimulation attribute) INTERNAL (aind_data_schema.core.session.TriggerType attribute) internal_material (aind_data_schema.models.devices.Enclosure attribute) INTRA (aind_data_schema.core.processing.RegistrationType attribute) INVALID (aind_data_schema.core.metadata.MetadataStatus attribute) invert_pixel_values (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) investigators (aind_data_schema.core.data_description.DataDescription attribute) IS (aind_data_schema.models.coordinates.AnatomicalDirection attribute) is_clock_generator (aind_data_schema.models.devices.HarpDevice attribute) ISI (aind_data_schema.models.modalities.Modality attribute) (aind_data_schema.models.platforms.Platform attribute) ISL (aind_data_schema.models.organizations.Organization attribute) item_number (aind_data_schema.models.devices.Laser attribute) J JAX (aind_data_schema.models.organizations.Organization attribute) JULABO (aind_data_schema.models.organizations.Organization attribute) K K (aind_data_schema.models.units.TemperatureUnit attribute) KG (aind_data_schema.models.units.MassUnit attribute) KHZ (aind_data_schema.models.units.FrequencyUnit attribute) KWIK_CAST (aind_data_schema.core.procedures.ProtectiveMaterial attribute) L L (aind_data_schema.models.units.VolumeUnit attribute) label (aind_data_schema.core.data_description.DataDescription attribute) LAMBDA (aind_data_schema.core.procedures.CoordinateReferenceLocation attribute) (aind_data_schema.models.coordinates.Origin attribute) laser_assemblies (aind_data_schema.core.rig.Rig attribute) LASER_COMBINER (aind_data_schema.models.devices.ImagingDeviceType attribute) LASER_COUPLER (aind_data_schema.models.devices.ImagingDeviceType attribute) laser_interlock (aind_data_schema.models.devices.Enclosure attribute) LASER_MANUFACTURERS (aind_data_schema.models.organizations.Organization attribute) lasers (aind_data_schema.models.devices.EphysProbe attribute) (aind_data_schema.models.devices.LaserAssembly attribute) last_modified (aind_data_schema.core.metadata.Metadata attribute) LED_MANUFACTURERS (aind_data_schema.models.organizations.Organization attribute) LEE (aind_data_schema.models.organizations.Organization attribute) LEFT (aind_data_schema.core.procedures.Side attribute) (aind_data_schema.models.devices.SpoutSide attribute) LEICA (aind_data_schema.models.organizations.Organization attribute) length (aind_data_schema.models.coordinates.Size3d attribute) (aind_data_schema.models.devices.OpticalTable attribute) length_unit (aind_data_schema.models.devices.FiberProbe attribute) lens (aind_data_schema.models.devices.CameraAssembly attribute) LENS_MANUFACTURERS (aind_data_schema.models.organizations.Organization attribute) LENS_SIZE_1 (aind_data_schema.models.devices.LensSize attribute) LENS_SIZE_2 (aind_data_schema.models.devices.LensSize attribute) lens_size_unit (aind_data_schema.models.devices.Lens attribute) lenses (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.rig.Rig attribute) LensSize (class in aind_data_schema.models.devices) level (aind_data_schema.core.procedures.Anaesthetic attribute) LG (aind_data_schema.models.organizations.Organization attribute) license (aind_data_schema.core.data_description.DataDescription attribute) lick_sensor (aind_data_schema.models.devices.RewardSpout attribute) lick_sensor_type (aind_data_schema.models.devices.RewardSpout attribute) LICKETY_SPLIT (aind_data_schema.models.harp_types.HarpDeviceType attribute) LickSensorType (class in aind_data_schema.models.devices) LIFECANVAS (aind_data_schema.models.organizations.Organization attribute) light_cycle (aind_data_schema.core.subject.Housing attribute) light_source_config (aind_data_schema.core.session.StimulusEpoch attribute) light_source_name (aind_data_schema.imaging.tile.Channel attribute) light_sources (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.rig.Rig attribute) (aind_data_schema.core.session.Stream attribute) lights_off_time (aind_data_schema.core.subject.LightCycle attribute) lights_on_time (aind_data_schema.core.subject.LightCycle attribute) line_shear (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) line_shear_units (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) LOAD_CELLS (aind_data_schema.models.harp_types.HarpDeviceType attribute) local_storage_directory (aind_data_schema.core.acquisition.Acquisition attribute) location (aind_data_schema.core.metadata.Metadata attribute) LONGPASS (aind_data_schema.models.devices.FilterType attribute) lot_number (aind_data_schema.models.reagent.Reagent attribute) LR (aind_data_schema.models.coordinates.AnatomicalDirection attribute) M M (aind_data_schema.models.units.ConcentrationUnit attribute) (aind_data_schema.models.units.SizeUnit attribute) (aind_data_schema.models.units.TimeUnit attribute) MACACA_MULATTA (aind_data_schema.models.species.Species attribute) magnetic_brake (aind_data_schema.models.devices.Wheel attribute) magnetic_strength (aind_data_schema.models.devices.Scanner attribute) magnetic_strength_unit (aind_data_schema.models.devices.Scanner attribute) MagneticStrength (class in aind_data_schema.models.devices) magnification (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) (aind_data_schema.models.devices.Objective attribute) maintenance (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.session.Session attribute) maintenance_date (aind_data_schema.models.devices.Maintenance attribute) MALE (aind_data_schema.core.subject.Sex attribute) manipulator (aind_data_schema.models.devices.EphysAssembly attribute) (aind_data_schema.models.devices.FiberAssembly attribute) (aind_data_schema.models.devices.LaserAssembly attribute) manipulator_coordinates (aind_data_schema.core.session.ManipulatorModule attribute) MANIPULATOR_MANUFACTURERS (aind_data_schema.models.organizations.Organization attribute) manipulator_modules (aind_data_schema.core.session.Stream attribute) MANUAL_ANNOTATION (aind_data_schema.models.process_names.ProcessName attribute) manufacturer (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.DAQDevice attribute) (aind_data_schema.models.devices.Detector attribute) (aind_data_schema.models.devices.Device attribute) (aind_data_schema.models.devices.Filter attribute) (aind_data_schema.models.devices.HarpDevice attribute) (aind_data_schema.models.devices.Laser attribute) (aind_data_schema.models.devices.Lens attribute) (aind_data_schema.models.devices.LightEmittingDiode attribute) (aind_data_schema.models.devices.Manipulator attribute) (aind_data_schema.models.devices.Monitor attribute) (aind_data_schema.models.devices.NeuropixelsBasestation attribute) (aind_data_schema.models.devices.Olfactometer attribute) (aind_data_schema.models.devices.OpenEphysAcquisitionBoard attribute) (aind_data_schema.models.devices.Speaker attribute) mass (aind_data_schema.core.procedures.Antibody attribute) MASS_PERCENT (aind_data_schema.models.units.ConcentrationUnit attribute) mass_unit (aind_data_schema.core.procedures.Antibody attribute) MassUnit (class in aind_data_schema.models.units) material_type (aind_data_schema.core.procedures.NonViralMaterial attribute) (aind_data_schema.core.procedures.ViralMaterial attribute) maternal_genotype (aind_data_schema.core.subject.BreedingInfo attribute) maternal_id (aind_data_schema.core.subject.BreedingInfo attribute) max_aperture (aind_data_schema.models.devices.Lens attribute) max_dmd_patterns (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) max_frame_rate (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) maximum_power (aind_data_schema.models.devices.Laser attribute) MEADOWLARK (aind_data_schema.models.organizations.Organization attribute) medium (aind_data_schema.core.acquisition.Immersion attribute) MERFISH (aind_data_schema.models.modalities.Modality attribute) (aind_data_schema.models.platforms.Platform attribute) MESOSPIM (aind_data_schema.models.devices.ImagingInstrumentType attribute) (aind_data_schema.models.platforms.Platform attribute) metadata_status (aind_data_schema.core.metadata.Metadata attribute) MetadataStatus (class in aind_data_schema.core.metadata) MG (aind_data_schema.models.units.MassUnit attribute) MGI (aind_data_schema.models.registry.Registry attribute) mHZ (aind_data_schema.models.units.FrequencyUnit attribute) MI_ULED_PROBE (aind_data_schema.models.devices.ProbeModel attribute) MIDLINE (aind_data_schema.core.procedures.CoordinateReferenceLocation attribute) MIGHTY_ZAP (aind_data_schema.models.organizations.Organization attribute) minimum_water_per_day (aind_data_schema.core.procedures.WaterRestriction attribute) minimum_water_per_day_unit (aind_data_schema.core.procedures.WaterRestriction attribute) MISSING (aind_data_schema.core.metadata.MetadataStatus attribute) MITUTUYO (aind_data_schema.models.organizations.Organization attribute) MKS_NEWPORT (aind_data_schema.models.organizations.Organization attribute) ml (aind_data_schema.models.coordinates.CcfCoords attribute) ML (aind_data_schema.models.units.VolumeUnit attribute) MM (aind_data_schema.models.units.SizeUnit attribute) MMF (aind_data_schema.models.devices.Coupling attribute) modalities (aind_data_schema.core.rig.Rig attribute) modality (aind_data_schema.core.data_description.DataDescription attribute) Modality (class in aind_data_schema.models.modalities) model (aind_data_schema.models.devices.Device attribute) model_post_init() (aind_data_schema.base.AindCoreModel method) (aind_data_schema.core.acquisition.Acquisition method) (aind_data_schema.core.data_description.AnalysisDescription method) (aind_data_schema.core.data_description.DataDescription method) (aind_data_schema.core.data_description.DerivedDataDescription method) (aind_data_schema.core.data_description.RawDataDescription method) (aind_data_schema.core.instrument.Instrument method) (aind_data_schema.core.metadata.Metadata method) (aind_data_schema.core.mri_session.MriSession method) (aind_data_schema.core.procedures.Procedures method) (aind_data_schema.core.processing.Processing method) (aind_data_schema.core.rig.Rig method) (aind_data_schema.core.session.Session method) (aind_data_schema.core.subject.Subject method) modification_date (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.rig.Rig attribute) module aind_data_schema aind_data_schema.base aind_data_schema.core aind_data_schema.core.acquisition aind_data_schema.core.data_description aind_data_schema.core.instrument aind_data_schema.core.metadata aind_data_schema.core.mri_session aind_data_schema.core.procedures aind_data_schema.core.processing aind_data_schema.core.rig aind_data_schema.core.session aind_data_schema.core.subject aind_data_schema.imaging aind_data_schema.imaging.tile aind_data_schema.models aind_data_schema.models.coordinates aind_data_schema.models.devices aind_data_schema.models.harp_types aind_data_schema.models.modalities aind_data_schema.models.organizations aind_data_schema.models.pid_names aind_data_schema.models.platforms aind_data_schema.models.process_names aind_data_schema.models.reagent aind_data_schema.models.registry aind_data_schema.models.species aind_data_schema.models.stimulus aind_data_schema.models.units aind_data_schema.utils aind_data_schema.utils.diagrams aind_data_schema.utils.json_writer aind_data_schema.utils.schema_version_bump module_angle (aind_data_schema.core.session.DomeModule attribute) (aind_data_schema.models.coordinates.ModuleOrientation2d attribute) (aind_data_schema.models.coordinates.ModuleOrientation3d attribute) MONITOR_MANUFACTURERS (aind_data_schema.models.organizations.Organization attribute) motion_padding_x (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) motion_padding_y (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) motorized_stages (aind_data_schema.core.instrument.Instrument attribute) MOUNTING (aind_data_schema.core.procedures.SpecimenProcedureType attribute) mouse_platform (aind_data_schema.core.rig.Rig attribute) mouse_platform_name (aind_data_schema.core.session.Session attribute) MP_PHOTONIC_V1 (aind_data_schema.models.devices.ProbeModel attribute) MPI (aind_data_schema.models.organizations.Organization attribute) MRI (aind_data_schema.models.modalities.Modality attribute) (aind_data_schema.models.platforms.Platform attribute) MRI_14T (aind_data_schema.models.devices.MagneticStrength attribute) MRI_7T (aind_data_schema.models.devices.MagneticStrength attribute) mri_scanner (aind_data_schema.core.mri_session.MriSession attribute) MriScanSequence (class in aind_data_schema.core.mri_session) MS (aind_data_schema.models.units.TimeUnit attribute) MSMA (aind_data_schema.core.data_description.Group attribute) MULTI (aind_data_schema.models.devices.ImmersionMedium attribute) MULTIBAND (aind_data_schema.models.devices.FilterType attribute) MULTIPLANE_OPHYS (aind_data_schema.models.platforms.Platform attribute) MUS_MUSCULUS (aind_data_schema.models.species.Species attribute) MW (aind_data_schema.models.units.PowerUnit attribute) N name (aind_data_schema.core.data_description.DataDescription attribute) (aind_data_schema.core.metadata.Metadata attribute) (aind_data_schema.core.procedures.ViralMaterial attribute) (aind_data_schema.core.processing.AnalysisProcess attribute) (aind_data_schema.core.processing.DataProcess attribute) (aind_data_schema.core.session.DetectorConfig attribute) (aind_data_schema.core.session.EphysProbeConfig attribute) (aind_data_schema.core.session.LaserConfig attribute) (aind_data_schema.core.session.LightEmittingDiodeConfig attribute) (aind_data_schema.core.session.SpeakerConfig attribute) (aind_data_schema.models.coordinates.Axis attribute) (aind_data_schema.models.coordinates.ImageAxis attribute) (aind_data_schema.models.devices.CameraAssembly attribute) (aind_data_schema.models.devices.Device attribute) (aind_data_schema.models.devices.EphysAssembly attribute) (aind_data_schema.models.devices.FiberAssembly attribute) (aind_data_schema.models.devices.LaserAssembly attribute) (aind_data_schema.models.devices.Software attribute) (aind_data_schema.models.harp_types.Behavior attribute) (aind_data_schema.models.harp_types.CameraController attribute) (aind_data_schema.models.harp_types.ClockSynchronizer attribute) (aind_data_schema.models.harp_types.Cuttlefish attribute) (aind_data_schema.models.harp_types.GenericHarpDevice attribute) (aind_data_schema.models.harp_types.InputExpander attribute) (aind_data_schema.models.harp_types.LicketySplit attribute) (aind_data_schema.models.harp_types.LoadCells attribute) (aind_data_schema.models.harp_types.Olfactometer attribute) (aind_data_schema.models.harp_types.SniffDetector attribute) (aind_data_schema.models.harp_types.SoundCard attribute) (aind_data_schema.models.harp_types.StepperDriver attribute) (aind_data_schema.models.harp_types.Synchronizer attribute) (aind_data_schema.models.harp_types.TimestampGeneratorGen1 attribute) (aind_data_schema.models.harp_types.TimestampGeneratorGen3 attribute) (aind_data_schema.models.harp_types.Treadmill attribute) (aind_data_schema.models.modalities.Behavior attribute) (aind_data_schema.models.modalities.BehaviorVideos attribute) (aind_data_schema.models.modalities.Confocal attribute) (aind_data_schema.models.modalities.Ecephys attribute) (aind_data_schema.models.modalities.Electromyography attribute) (aind_data_schema.models.modalities.Fib attribute) (aind_data_schema.models.modalities.Fmost attribute) (aind_data_schema.models.modalities.Icephys attribute) (aind_data_schema.models.modalities.Isi attribute) (aind_data_schema.models.modalities.Merfish attribute) (aind_data_schema.models.modalities.Mri attribute) (aind_data_schema.models.modalities.POphys attribute) (aind_data_schema.models.modalities.Slap attribute) (aind_data_schema.models.modalities.Spim attribute) (aind_data_schema.models.organizations.AAOptoElectronic attribute) (aind_data_schema.models.organizations.Abcam attribute) (aind_data_schema.models.organizations.AilipuTechnologyCo attribute) (aind_data_schema.models.organizations.AllenInstitute attribute) (aind_data_schema.models.organizations.AllenInstituteForBrainScience attribute) (aind_data_schema.models.organizations.AllenInstituteForNeuralDynamics attribute) (aind_data_schema.models.organizations.Allied attribute) (aind_data_schema.models.organizations.AmsOsram attribute) (aind_data_schema.models.organizations.AppliedScientificInstrumentation attribute) (aind_data_schema.models.organizations.ArecontVisionCostar attribute) (aind_data_schema.models.organizations.Asus attribute) (aind_data_schema.models.organizations.Basler attribute) (aind_data_schema.models.organizations.CambridgeTechnology attribute) (aind_data_schema.models.organizations.CarlZeiss attribute) (aind_data_schema.models.organizations.ChampalimaudFoundation attribute) (aind_data_schema.models.organizations.Chroma attribute) (aind_data_schema.models.organizations.CoherentScientific attribute) (aind_data_schema.models.organizations.ColumbiaUniversity attribute) (aind_data_schema.models.organizations.Computar attribute) (aind_data_schema.models.organizations.Conoptics attribute) (aind_data_schema.models.organizations.Custom attribute) (aind_data_schema.models.organizations.Dodotronic attribute) (aind_data_schema.models.organizations.Doric attribute) (aind_data_schema.models.organizations.Ealing attribute) (aind_data_schema.models.organizations.EdmundOptics attribute) (aind_data_schema.models.organizations.Euresys attribute) (aind_data_schema.models.organizations.Fujinon attribute) (aind_data_schema.models.organizations.Hamamatsu attribute) (aind_data_schema.models.organizations.Hamilton attribute) (aind_data_schema.models.organizations.HuazhongUniversityOfScienceAndTechnology attribute) (aind_data_schema.models.organizations.InfinityPhotoOptical attribute) (aind_data_schema.models.organizations.InteruniversityMicroelectronicsCenter attribute) (aind_data_schema.models.organizations.IRRobotCo attribute) (aind_data_schema.models.organizations.ISLProductsInternational attribute) (aind_data_schema.models.organizations.JacksonLaboratory attribute) (aind_data_schema.models.organizations.Julabo attribute) (aind_data_schema.models.organizations.Leica attribute) (aind_data_schema.models.organizations.Lg attribute) (aind_data_schema.models.organizations.LifeCanvas attribute) (aind_data_schema.models.organizations.MeadowlarkOptics attribute) (aind_data_schema.models.organizations.Mitutuyo attribute) (aind_data_schema.models.organizations.MKSNewport attribute) (aind_data_schema.models.organizations.Mpi attribute) (aind_data_schema.models.organizations.NationalInstituteOfNeurologicalDisordersAndStroke attribute) (aind_data_schema.models.organizations.NationalInstruments attribute) (aind_data_schema.models.organizations.Navitar attribute) (aind_data_schema.models.organizations.Neurophotometrics attribute) (aind_data_schema.models.organizations.NewScaleTechnologies attribute) (aind_data_schema.models.organizations.NewYorkUniversity attribute) (aind_data_schema.models.organizations.Nikon attribute) (aind_data_schema.models.organizations.NResearch attribute) (aind_data_schema.models.organizations.Olympus attribute) (aind_data_schema.models.organizations.OpenEphysProductionSite attribute) (aind_data_schema.models.organizations.Optotune attribute) (aind_data_schema.models.organizations.Other attribute) (aind_data_schema.models.organizations.Oxxius attribute) (aind_data_schema.models.organizations.Prizmatix attribute) (aind_data_schema.models.organizations.Quantifi attribute) (aind_data_schema.models.organizations.RaspberryPi attribute) (aind_data_schema.models.organizations.SchneiderKreuznach attribute) (aind_data_schema.models.organizations.SecondOrderEffects attribute) (aind_data_schema.models.organizations.Semrock attribute) (aind_data_schema.models.organizations.SigmaAldritch attribute) (aind_data_schema.models.organizations.SimonsFoundation attribute) (aind_data_schema.models.organizations.Spinnaker attribute) (aind_data_schema.models.organizations.Tamron attribute) (aind_data_schema.models.organizations.TeledyneFLIR attribute) (aind_data_schema.models.organizations.TheImagingSource attribute) (aind_data_schema.models.organizations.TheLeeCompany attribute) (aind_data_schema.models.organizations.Thermofisher attribute) (aind_data_schema.models.organizations.Thorlabs attribute) (aind_data_schema.models.organizations.TMC attribute) (aind_data_schema.models.organizations.Tymphany attribute) (aind_data_schema.models.organizations.Vieworks attribute) (aind_data_schema.models.organizations.Vortran attribute) (aind_data_schema.models.pid_names.BaseName attribute) (aind_data_schema.models.platforms.Behavior attribute) (aind_data_schema.models.platforms.Confocal attribute) (aind_data_schema.models.platforms.Ecephys attribute) (aind_data_schema.models.platforms.ExaSpim attribute) (aind_data_schema.models.platforms.Fip attribute) (aind_data_schema.models.platforms.Hcr attribute) (aind_data_schema.models.platforms.Hsfp attribute) (aind_data_schema.models.platforms.Isi attribute) (aind_data_schema.models.platforms.Merfish attribute) (aind_data_schema.models.platforms.MesoSpim attribute) (aind_data_schema.models.platforms.Mri attribute) (aind_data_schema.models.platforms.MultiplaneOphys attribute) (aind_data_schema.models.platforms.SingleplaneOphys attribute) (aind_data_schema.models.platforms.Slap2 attribute) (aind_data_schema.models.platforms.SmartSpim attribute) (aind_data_schema.models.reagent.Reagent attribute) (aind_data_schema.models.registry.Addgene attribute) (aind_data_schema.models.registry.MouseGenomeInformatics attribute) (aind_data_schema.models.registry.NationalCenterForBiotechnologyInformation attribute) (aind_data_schema.models.registry.OpenResearcherAndContributorID attribute) (aind_data_schema.models.registry.ResearchOrganizationRegistry attribute) (aind_data_schema.models.registry.ResearchResourceIdentifiers attribute) (aind_data_schema.models.species.CallithrixJacchus attribute) (aind_data_schema.models.species.HomoSapiens attribute) (aind_data_schema.models.species.MacacaMulatta attribute) (aind_data_schema.models.species.MusMusculus attribute) (aind_data_schema.models.species.RattusNorvegicus attribute) name_map (aind_data_schema.models.organizations.Organization property) NATIONAL_INSTRUMENTS (aind_data_schema.models.organizations.Organization attribute) NAVITAR (aind_data_schema.models.organizations.Organization attribute) NCBI (aind_data_schema.models.registry.Registry attribute) ND (aind_data_schema.models.devices.FilterType attribute) NEUROPHOTOMETRICS (aind_data_schema.models.organizations.Organization attribute) NEUROPIL_SUBTRACTION (aind_data_schema.models.process_names.ProcessName attribute) NEW_SCALE_TECHNOLOGIES (aind_data_schema.models.organizations.Organization attribute) NG (aind_data_schema.models.units.MassUnit attribute) NIKON (aind_data_schema.models.organizations.Organization attribute) NINDS (aind_data_schema.models.organizations.Organization attribute) NL (aind_data_schema.models.units.VolumeUnit attribute) NM (aind_data_schema.models.units.ConcentrationUnit attribute) (aind_data_schema.models.units.SizeUnit attribute) NO_SPECIAL_CHARS (aind_data_schema.core.data_description.DataRegex attribute) NO_SPECIAL_CHARS_EXCEPT_SPACE (aind_data_schema.core.data_description.DataRegex attribute) NO_UNDERSCORES (aind_data_schema.core.data_description.DataRegex attribute) NONE (aind_data_schema.core.session.StimulusModality attribute) (aind_data_schema.core.subject.HomeCageEnrichment attribute) (aind_data_schema.models.devices.BinMode attribute) (aind_data_schema.models.devices.Cooling attribute) NOTCH (aind_data_schema.models.devices.FilterType attribute) note (aind_data_schema.core.processing.PipelineProcess attribute) notes (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.mri_session.MRIScan attribute) (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.Antibody attribute) (aind_data_schema.core.procedures.OphysProbe attribute) (aind_data_schema.core.procedures.OtherSubjectProcedure attribute) (aind_data_schema.core.procedures.Procedures attribute) (aind_data_schema.core.procedures.SpecimenProcedure attribute) (aind_data_schema.core.procedures.Surgery attribute) (aind_data_schema.core.procedures.TrainingProtocol attribute) (aind_data_schema.core.processing.DataProcess attribute) (aind_data_schema.core.processing.Processing attribute) (aind_data_schema.core.rig.Rig attribute) (aind_data_schema.core.session.DomeModule attribute) (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.RewardDeliveryConfig attribute) (aind_data_schema.core.session.Session attribute) (aind_data_schema.core.session.StimulusEpoch attribute) (aind_data_schema.core.session.Stream attribute) (aind_data_schema.core.subject.Subject attribute) (aind_data_schema.imaging.tile.AcquisitionTile attribute) (aind_data_schema.models.coordinates.RelativePosition attribute) (aind_data_schema.models.devices.Calibration attribute) (aind_data_schema.models.devices.Device attribute) (aind_data_schema.models.devices.Maintenance attribute) (aind_data_schema.models.devices.RewardSpout attribute) (aind_data_schema.models.stimulus.AuditoryStimulation attribute) (aind_data_schema.models.stimulus.OlfactometerChannelConfig attribute) (aind_data_schema.models.stimulus.OlfactoryStimulation attribute) (aind_data_schema.models.stimulus.OptoStimulation attribute) (aind_data_schema.models.stimulus.PhotoStimulation attribute) (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) (aind_data_schema.models.stimulus.VisualStimulation attribute) NP1 (aind_data_schema.models.devices.ProbeModel attribute) NP2_MULTI_SHANK (aind_data_schema.models.devices.ProbeModel attribute) NP2_QUAD_BASE (aind_data_schema.models.devices.ProbeModel attribute) NP2_SINGLE_SHANK (aind_data_schema.models.devices.ProbeModel attribute) NP_OPTO_DEMONSTRATOR (aind_data_schema.models.devices.ProbeModel attribute) NP_UHD_FIXED (aind_data_schema.models.devices.ProbeModel attribute) NP_UHD_SWITCHABLE (aind_data_schema.models.devices.ProbeModel attribute) NRESEARCH (aind_data_schema.models.organizations.Organization attribute) NS (aind_data_schema.models.units.TimeUnit attribute) NUCLEAR (aind_data_schema.core.procedures.StainType attribute) number_faces (aind_data_schema.models.devices.PolygonalScanner attribute) number_groups (aind_data_schema.models.stimulus.PhotoStimulation attribute) number_of_neurons (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) number_of_plane_repeats_per_volume (aind_data_schema.core.session.Stack attribute) number_of_planes (aind_data_schema.core.session.Stack attribute) number_of_rounds (aind_data_schema.core.procedures.HCRSeries attribute) number_of_slices (aind_data_schema.core.procedures.Sectioning attribute) number_of_volume_repeats (aind_data_schema.core.session.Stack attribute) number_pulse_trains (aind_data_schema.models.stimulus.OptoStimulation attribute) number_spirals (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) number_trials (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) numerical_aperture (aind_data_schema.models.devices.FiberProbe attribute) (aind_data_schema.models.devices.Objective attribute) (aind_data_schema.models.devices.Patch attribute) NVIDIA (aind_data_schema.models.devices.DeviceDriver attribute) NYU (aind_data_schema.models.organizations.Organization attribute) O OBJECTIVE (aind_data_schema.models.devices.ImagingDeviceType attribute) objective_type (aind_data_schema.models.devices.Objective attribute) objectives (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.rig.Rig attribute) ObjectiveType (class in aind_data_schema.models.devices) ODOR (aind_data_schema.models.devices.ChannelType attribute) odorant (aind_data_schema.models.stimulus.OlfactometerChannelConfig attribute) odorant_dilution (aind_data_schema.models.stimulus.OlfactometerChannelConfig attribute) odorant_dilution_unit (aind_data_schema.models.stimulus.OlfactometerChannelConfig attribute) OEPS (aind_data_schema.models.organizations.Organization attribute) off_time (aind_data_schema.models.devices.PockelsCell attribute) OIL (aind_data_schema.models.devices.ImmersionMedium attribute) OLFACTOMETER (aind_data_schema.models.harp_types.HarpDeviceType attribute) OLFACTORY (aind_data_schema.core.session.StimulusModality attribute) OLYMPUS (aind_data_schema.models.organizations.Organization attribute) on_time (aind_data_schema.models.devices.PockelsCell attribute) ONE_OF (aind_data_schema.models.harp_types.HarpDeviceType attribute) (aind_data_schema.models.modalities.Modality attribute) (aind_data_schema.models.organizations.Organization attribute) (aind_data_schema.models.platforms.Platform attribute) (aind_data_schema.models.species.Species attribute) OPENGL (aind_data_schema.models.devices.DeviceDriver attribute) OPHYS (aind_data_schema.core.data_description.Group attribute) ophys_fovs (aind_data_schema.core.session.Stream attribute) ophys_probe (aind_data_schema.core.procedures.OphysProbe attribute) optical_tables (aind_data_schema.core.instrument.Instrument attribute) optimized_wavelength_range (aind_data_schema.models.devices.Lens attribute) OPTOGENETICS (aind_data_schema.core.session.StimulusModality attribute) OPTOTUNE (aind_data_schema.models.organizations.Organization attribute) ORCID (aind_data_schema.models.registry.Registry attribute) Organization (class in aind_data_schema.models.organizations) origin (aind_data_schema.core.rig.Rig attribute) Origin (class in aind_data_schema.models.coordinates) OSRAM (aind_data_schema.models.organizations.Organization attribute) OTHER (aind_data_schema.core.mri_session.MriScanSequence attribute) (aind_data_schema.core.procedures.CraniotomyType attribute) (aind_data_schema.core.procedures.ProtectiveMaterial attribute) (aind_data_schema.core.procedures.SpecimenProcedureType attribute) (aind_data_schema.core.session.RewardSolution attribute) (aind_data_schema.core.subject.HomeCageEnrichment attribute) (aind_data_schema.models.coordinates.AnatomicalDirection attribute) (aind_data_schema.models.coordinates.Origin attribute) (aind_data_schema.models.devices.CameraTarget attribute) (aind_data_schema.models.devices.Coupling attribute) (aind_data_schema.models.devices.DataInterface attribute) (aind_data_schema.models.devices.DetectorType attribute) (aind_data_schema.models.devices.ImagingDeviceType attribute) (aind_data_schema.models.devices.ImagingInstrumentType attribute) (aind_data_schema.models.devices.ImmersionMedium attribute) (aind_data_schema.models.devices.SpoutSide attribute) (aind_data_schema.models.organizations.Organization attribute) (aind_data_schema.models.process_names.ProcessName attribute) (aind_data_schema.models.stimulus.FilterType attribute) other_parameters (aind_data_schema.models.stimulus.OptoStimulation attribute) (aind_data_schema.models.stimulus.PhotoStimulation attribute) (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) other_probes (aind_data_schema.core.procedures.HybridizationChainReaction attribute) other_stains (aind_data_schema.core.procedures.HybridizationChainReaction attribute) other_targeted_structures (aind_data_schema.core.session.EphysProbeConfig attribute) output (aind_data_schema.models.devices.Calibration attribute) (aind_data_schema.models.devices.Disc attribute) output_location (aind_data_schema.core.processing.DataProcess attribute) output_parameters (aind_data_schema.core.session.StimulusEpoch attribute) output_power_unit (aind_data_schema.core.session.FiberConnectionConfig attribute) output_specimen_ids (aind_data_schema.core.procedures.Perfusion attribute) (aind_data_schema.core.procedures.Sectioning attribute) outputs (aind_data_schema.core.processing.DataProcess attribute) OXXIUS (aind_data_schema.models.organizations.Organization attribute) P PA (aind_data_schema.models.coordinates.AnatomicalDirection attribute) padding_unit (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) parameters (aind_data_schema.core.processing.DataProcess attribute) (aind_data_schema.models.devices.Software attribute) PARENT (aind_data_schema.core.session.SlapSessionType attribute) parse_name() (aind_data_schema.core.data_description.AnalysisDescription class method) (aind_data_schema.core.data_description.DataDescription class method) (aind_data_schema.core.data_description.DerivedDataDescription class method) (aind_data_schema.core.data_description.RawDataDescription class method) patch_cord_name (aind_data_schema.core.session.FiberConnectionConfig attribute) patch_cord_output_power (aind_data_schema.core.session.FiberConnectionConfig attribute) patch_cords (aind_data_schema.core.rig.Rig attribute) paternal_genotype (aind_data_schema.core.subject.BreedingInfo attribute) paternal_id (aind_data_schema.core.subject.BreedingInfo attribute) path_to_array_of_frame_rates (aind_data_schema.core.session.SlapFieldOfView attribute) path_to_cad (aind_data_schema.models.devices.Device attribute) PBS (aind_data_schema.models.devices.ImmersionMedium attribute) PCIE (aind_data_schema.models.devices.DataInterface attribute) PERCENT (aind_data_schema.models.units.PowerUnit attribute) (aind_data_schema.models.units.UnitlessUnit attribute) PERPENDICULAR_AXIS (aind_data_schema.models.devices.StageAxisDirection attribute) photobleaching_date (aind_data_schema.models.devices.Patch attribute) PIEZOELECTIC (aind_data_schema.models.devices.LickSensorType attribute) pipeline_url (aind_data_schema.core.processing.PipelineProcess attribute) pipeline_version (aind_data_schema.core.processing.PipelineProcess attribute) pitch (aind_data_schema.models.coordinates.Orientation3d attribute) pixel_size (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) pixel_size_unit (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) plasmid_tars_alias (aind_data_schema.core.procedures.TarsVirusIdentifiers attribute) PLASTIC_SHELTER (aind_data_schema.core.subject.HomeCageEnrichment attribute) PLASTIC_TUBE (aind_data_schema.core.subject.HomeCageEnrichment attribute) platform (aind_data_schema.core.data_description.DataDescription attribute) Platform (class in aind_data_schema.models.platforms) PLATINUM_IRIDIUM (aind_data_schema.core.procedures.GroundWireMaterial attribute) PMT (aind_data_schema.models.devices.DetectorType attribute) pockels_cells (aind_data_schema.core.rig.Rig attribute) polygonal_scanner (aind_data_schema.models.devices.PockelsCell attribute) polygonal_scanners (aind_data_schema.core.rig.Rig attribute) POPHYS (aind_data_schema.models.modalities.Modality attribute) port (aind_data_schema.models.devices.DAQChannel attribute) port_index (aind_data_schema.models.devices.Device attribute) ports (aind_data_schema.models.devices.NeuropixelsBasestation attribute) (aind_data_schema.models.devices.OpenEphysAcquisitionBoard attribute) position (aind_data_schema.models.devices.CameraAssembly attribute) (aind_data_schema.models.devices.Monitor attribute) (aind_data_schema.models.devices.Speaker attribute) power (aind_data_schema.core.session.FieldOfView attribute) power_unit (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.models.devices.Laser attribute) PowerUnit (class in aind_data_schema.models.units) prep_date (aind_data_schema.core.procedures.TarsVirusIdentifiers attribute) prep_lot_number (aind_data_schema.core.procedures.TarsVirusIdentifiers attribute) prep_protocol (aind_data_schema.core.procedures.TarsVirusIdentifiers attribute) prep_type (aind_data_schema.core.procedures.TarsVirusIdentifiers attribute) PRIMARY (aind_data_schema.core.procedures.ImmunolabelClass attribute) (aind_data_schema.models.devices.ObjectiveType attribute) primary_scan (aind_data_schema.core.mri_session.MRIScan attribute) primary_targeted_structure (aind_data_schema.core.session.ManipulatorModule attribute) PRISM (aind_data_schema.models.devices.ImagingDeviceType attribute) PRIZMATIX (aind_data_schema.models.organizations.Organization attribute) probe_concentration (aind_data_schema.core.procedures.HybridizationChainReaction attribute) probe_concentration_unit (aind_data_schema.core.procedures.HybridizationChainReaction attribute) probe_model (aind_data_schema.models.devices.EphysProbe attribute) probe_sequences (aind_data_schema.core.procedures.OligoProbe attribute) ProbeModel (class in aind_data_schema.models.devices) probes (aind_data_schema.core.procedures.FiberImplant attribute) (aind_data_schema.models.devices.EphysAssembly attribute) (aind_data_schema.models.devices.ProbePort attribute) procedure_name (aind_data_schema.core.procedures.SpecimenProcedure attribute) procedure_type (aind_data_schema.core.procedures.Craniotomy attribute) (aind_data_schema.core.procedures.FiberImplant attribute) (aind_data_schema.core.procedures.Headframe attribute) (aind_data_schema.core.procedures.IntraCerebellarVentricleInjection attribute) (aind_data_schema.core.procedures.IntraCisternalMagnaInjection attribute) (aind_data_schema.core.procedures.IntraperitonealInjection attribute) (aind_data_schema.core.procedures.IontophoresisInjection attribute) (aind_data_schema.core.procedures.NanojectInjection attribute) (aind_data_schema.core.procedures.OtherSubjectProcedure attribute) (aind_data_schema.core.procedures.Perfusion attribute) (aind_data_schema.core.procedures.ProtectiveMaterialReplacement attribute) (aind_data_schema.core.procedures.RetroOrbitalInjection attribute) (aind_data_schema.core.procedures.Sectioning attribute) (aind_data_schema.core.procedures.SpecimenProcedure attribute) (aind_data_schema.core.procedures.Surgery attribute) (aind_data_schema.core.procedures.TrainingProtocol attribute) (aind_data_schema.core.procedures.WaterRestriction attribute) procedures (aind_data_schema.core.metadata.Metadata attribute) (aind_data_schema.core.procedures.Surgery attribute) process_name (aind_data_schema.core.acquisition.ProcessingSteps attribute) (aind_data_schema.core.data_description.DerivedDataDescription attribute) processing (aind_data_schema.core.metadata.Metadata attribute) processing_pipeline (aind_data_schema.core.processing.Processing attribute) processing_steps (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.mri_session.MRIScan attribute) ProcessName (class in aind_data_schema.models.process_names) processor_full_name (aind_data_schema.core.processing.PipelineProcess attribute) project_name (aind_data_schema.core.data_description.AnalysisDescription attribute) (aind_data_schema.core.data_description.DataDescription attribute) PRONE (aind_data_schema.core.mri_session.SubjectPosition attribute) protective_material (aind_data_schema.core.procedures.Craniotomy attribute) (aind_data_schema.core.procedures.ProtectiveMaterialReplacement attribute) ProtectiveMaterial (class in aind_data_schema.core.procedures) protocol_id (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.Craniotomy attribute) (aind_data_schema.core.procedures.FiberImplant attribute) (aind_data_schema.core.procedures.Headframe attribute) (aind_data_schema.core.procedures.Injection attribute) (aind_data_schema.core.procedures.OtherSubjectProcedure attribute) (aind_data_schema.core.procedures.Perfusion attribute) (aind_data_schema.core.procedures.ProtectiveMaterialReplacement attribute) (aind_data_schema.core.procedures.SpecimenProcedure attribute) (aind_data_schema.core.procedures.Surgery attribute) (aind_data_schema.core.procedures.TrainingProtocol attribute) (aind_data_schema.core.session.Session attribute) (aind_data_schema.models.devices.Maintenance attribute) pulse_frequency (aind_data_schema.models.stimulus.OptoStimulation attribute) pulse_frequency_unit (aind_data_schema.models.stimulus.OptoStimulation attribute) pulse_per_revolution (aind_data_schema.models.devices.Wheel attribute) pulse_shape (aind_data_schema.models.stimulus.OptoStimulation attribute) pulse_train_duration (aind_data_schema.models.stimulus.OptoStimulation attribute) pulse_train_duration_unit (aind_data_schema.models.stimulus.OptoStimulation attribute) pulse_train_interval (aind_data_schema.models.stimulus.OptoStimulation attribute) pulse_train_interval_unit (aind_data_schema.models.stimulus.OptoStimulation attribute) pulse_width (aind_data_schema.models.stimulus.OptoStimulation attribute) pulse_width_unit (aind_data_schema.models.stimulus.OptoStimulation attribute) PulseShape (class in aind_data_schema.models.stimulus) PURIFIED (aind_data_schema.core.procedures.VirusPrepType attribute) PX (aind_data_schema.models.units.SizeUnit attribute) PXI (aind_data_schema.models.devices.DataInterface attribute) Q QUALITY_CONTROL_AND_ASSESSMENT (aind_data_schema.models.process_names.ProcessName attribute) QUANTIFI (aind_data_schema.models.organizations.Organization attribute) R RAD (aind_data_schema.models.units.AngleUnit attribute) radius (aind_data_schema.models.devices.Disc attribute) (aind_data_schema.models.devices.Wheel attribute) radius_unit (aind_data_schema.models.devices.Disc attribute) RAMP (aind_data_schema.models.stimulus.PulseShape attribute) RARE (aind_data_schema.core.mri_session.MriScanSequence attribute) rare_factor (aind_data_schema.core.mri_session.MRIScan attribute) RASPBERRYPI (aind_data_schema.models.organizations.Organization attribute) RATTUS_NOVEGICUS (aind_data_schema.models.species.Species attribute) RAW (aind_data_schema.core.data_description.DataLevel attribute) (aind_data_schema.core.data_description.DataRegex attribute) readout (aind_data_schema.core.procedures.HCRProbe attribute) (aind_data_schema.core.procedures.OligoProbe attribute) reagents (aind_data_schema.core.procedures.SpecimenProcedure attribute) (aind_data_schema.models.devices.Maintenance attribute) recording_software (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) recovery_time (aind_data_schema.core.procedures.Craniotomy attribute) (aind_data_schema.core.procedures.Injection attribute) recovery_time_unit (aind_data_schema.core.procedures.Craniotomy attribute) (aind_data_schema.core.procedures.Injection attribute) reference_location (aind_data_schema.core.procedures.Sectioning attribute) refractive_index (aind_data_schema.core.acquisition.Immersion attribute) REFRACTIVE_INDEX_MATCHING (aind_data_schema.core.procedures.SpecimenProcedureType attribute) refresh_rate (aind_data_schema.models.devices.Monitor attribute) RegexParts (class in aind_data_schema.core.data_description) registration_channel (aind_data_schema.core.processing.Registration attribute) registration_type (aind_data_schema.core.processing.Registration attribute) RegistrationType (class in aind_data_schema.core.processing) registry (aind_data_schema.models.organizations.AAOptoElectronic attribute) (aind_data_schema.models.organizations.Abcam attribute) (aind_data_schema.models.organizations.AilipuTechnologyCo attribute) (aind_data_schema.models.organizations.AllenInstitute attribute) (aind_data_schema.models.organizations.AllenInstituteForBrainScience attribute) (aind_data_schema.models.organizations.AllenInstituteForNeuralDynamics attribute) (aind_data_schema.models.organizations.Allied attribute) (aind_data_schema.models.organizations.AmsOsram attribute) (aind_data_schema.models.organizations.AppliedScientificInstrumentation attribute) (aind_data_schema.models.organizations.ArecontVisionCostar attribute) (aind_data_schema.models.organizations.Asus attribute) (aind_data_schema.models.organizations.Basler attribute) (aind_data_schema.models.organizations.CambridgeTechnology attribute) (aind_data_schema.models.organizations.CarlZeiss attribute) (aind_data_schema.models.organizations.ChampalimaudFoundation attribute) (aind_data_schema.models.organizations.Chroma attribute) (aind_data_schema.models.organizations.CoherentScientific attribute) (aind_data_schema.models.organizations.ColumbiaUniversity attribute) (aind_data_schema.models.organizations.Computar attribute) (aind_data_schema.models.organizations.Conoptics attribute) (aind_data_schema.models.organizations.Custom attribute) (aind_data_schema.models.organizations.Dodotronic attribute) (aind_data_schema.models.organizations.Doric attribute) (aind_data_schema.models.organizations.Ealing attribute) (aind_data_schema.models.organizations.EdmundOptics attribute) (aind_data_schema.models.organizations.Euresys attribute) (aind_data_schema.models.organizations.Fujinon attribute) (aind_data_schema.models.organizations.Hamamatsu attribute) (aind_data_schema.models.organizations.Hamilton attribute) (aind_data_schema.models.organizations.HuazhongUniversityOfScienceAndTechnology attribute) (aind_data_schema.models.organizations.InfinityPhotoOptical attribute) (aind_data_schema.models.organizations.InteruniversityMicroelectronicsCenter attribute) (aind_data_schema.models.organizations.IRRobotCo attribute) (aind_data_schema.models.organizations.ISLProductsInternational attribute) (aind_data_schema.models.organizations.JacksonLaboratory attribute) (aind_data_schema.models.organizations.Julabo attribute) (aind_data_schema.models.organizations.Leica attribute) (aind_data_schema.models.organizations.Lg attribute) (aind_data_schema.models.organizations.LifeCanvas attribute) (aind_data_schema.models.organizations.MeadowlarkOptics attribute) (aind_data_schema.models.organizations.Mitutuyo attribute) (aind_data_schema.models.organizations.MKSNewport attribute) (aind_data_schema.models.organizations.Mpi attribute) (aind_data_schema.models.organizations.NationalInstituteOfNeurologicalDisordersAndStroke attribute) (aind_data_schema.models.organizations.NationalInstruments attribute) (aind_data_schema.models.organizations.Navitar attribute) (aind_data_schema.models.organizations.Neurophotometrics attribute) (aind_data_schema.models.organizations.NewScaleTechnologies attribute) (aind_data_schema.models.organizations.NewYorkUniversity attribute) (aind_data_schema.models.organizations.Nikon attribute) (aind_data_schema.models.organizations.NResearch attribute) (aind_data_schema.models.organizations.Olympus attribute) (aind_data_schema.models.organizations.OpenEphysProductionSite attribute) (aind_data_schema.models.organizations.Optotune attribute) (aind_data_schema.models.organizations.Other attribute) (aind_data_schema.models.organizations.Oxxius attribute) (aind_data_schema.models.organizations.Prizmatix attribute) (aind_data_schema.models.organizations.Quantifi attribute) (aind_data_schema.models.organizations.RaspberryPi attribute) (aind_data_schema.models.organizations.SchneiderKreuznach attribute) (aind_data_schema.models.organizations.SecondOrderEffects attribute) (aind_data_schema.models.organizations.Semrock attribute) (aind_data_schema.models.organizations.SigmaAldritch attribute) (aind_data_schema.models.organizations.SimonsFoundation attribute) (aind_data_schema.models.organizations.Spinnaker attribute) (aind_data_schema.models.organizations.Tamron attribute) (aind_data_schema.models.organizations.TeledyneFLIR attribute) (aind_data_schema.models.organizations.TheImagingSource attribute) (aind_data_schema.models.organizations.TheLeeCompany attribute) (aind_data_schema.models.organizations.Thermofisher attribute) (aind_data_schema.models.organizations.Thorlabs attribute) (aind_data_schema.models.organizations.TMC attribute) (aind_data_schema.models.organizations.Tymphany attribute) (aind_data_schema.models.organizations.Vieworks attribute) (aind_data_schema.models.organizations.Vortran attribute) (aind_data_schema.models.pid_names.PIDName attribute) (aind_data_schema.models.species.CallithrixJacchus attribute) (aind_data_schema.models.species.HomoSapiens attribute) (aind_data_schema.models.species.MacacaMulatta attribute) (aind_data_schema.models.species.MusMusculus attribute) (aind_data_schema.models.species.RattusNorvegicus attribute) Registry (class in aind_data_schema.models.registry) registry_identifier (aind_data_schema.models.organizations.AAOptoElectronic attribute) (aind_data_schema.models.organizations.Abcam attribute) (aind_data_schema.models.organizations.AilipuTechnologyCo attribute) (aind_data_schema.models.organizations.AllenInstitute attribute) (aind_data_schema.models.organizations.AllenInstituteForBrainScience attribute) (aind_data_schema.models.organizations.AllenInstituteForNeuralDynamics attribute) (aind_data_schema.models.organizations.Allied attribute) (aind_data_schema.models.organizations.AmsOsram attribute) (aind_data_schema.models.organizations.AppliedScientificInstrumentation attribute) (aind_data_schema.models.organizations.ArecontVisionCostar attribute) (aind_data_schema.models.organizations.Asus attribute) (aind_data_schema.models.organizations.Basler attribute) (aind_data_schema.models.organizations.CambridgeTechnology attribute) (aind_data_schema.models.organizations.CarlZeiss attribute) (aind_data_schema.models.organizations.ChampalimaudFoundation attribute) (aind_data_schema.models.organizations.Chroma attribute) (aind_data_schema.models.organizations.CoherentScientific attribute) (aind_data_schema.models.organizations.ColumbiaUniversity attribute) (aind_data_schema.models.organizations.Computar attribute) (aind_data_schema.models.organizations.Conoptics attribute) (aind_data_schema.models.organizations.Custom attribute) (aind_data_schema.models.organizations.Dodotronic attribute) (aind_data_schema.models.organizations.Doric attribute) (aind_data_schema.models.organizations.Ealing attribute) (aind_data_schema.models.organizations.EdmundOptics attribute) (aind_data_schema.models.organizations.Euresys attribute) (aind_data_schema.models.organizations.Fujinon attribute) (aind_data_schema.models.organizations.Hamamatsu attribute) (aind_data_schema.models.organizations.Hamilton attribute) (aind_data_schema.models.organizations.HuazhongUniversityOfScienceAndTechnology attribute) (aind_data_schema.models.organizations.InfinityPhotoOptical attribute) (aind_data_schema.models.organizations.InteruniversityMicroelectronicsCenter attribute) (aind_data_schema.models.organizations.IRRobotCo attribute) (aind_data_schema.models.organizations.ISLProductsInternational attribute) (aind_data_schema.models.organizations.JacksonLaboratory attribute) (aind_data_schema.models.organizations.Julabo attribute) (aind_data_schema.models.organizations.Leica attribute) (aind_data_schema.models.organizations.Lg attribute) (aind_data_schema.models.organizations.LifeCanvas attribute) (aind_data_schema.models.organizations.MeadowlarkOptics attribute) (aind_data_schema.models.organizations.Mitutuyo attribute) (aind_data_schema.models.organizations.MKSNewport attribute) (aind_data_schema.models.organizations.Mpi attribute) (aind_data_schema.models.organizations.NationalInstituteOfNeurologicalDisordersAndStroke attribute) (aind_data_schema.models.organizations.NationalInstruments attribute) (aind_data_schema.models.organizations.Navitar attribute) (aind_data_schema.models.organizations.Neurophotometrics attribute) (aind_data_schema.models.organizations.NewScaleTechnologies attribute) (aind_data_schema.models.organizations.NewYorkUniversity attribute) (aind_data_schema.models.organizations.Nikon attribute) (aind_data_schema.models.organizations.NResearch attribute) (aind_data_schema.models.organizations.Olympus attribute) (aind_data_schema.models.organizations.OpenEphysProductionSite attribute) (aind_data_schema.models.organizations.Optotune attribute) (aind_data_schema.models.organizations.Other attribute) (aind_data_schema.models.organizations.Oxxius attribute) (aind_data_schema.models.organizations.Prizmatix attribute) (aind_data_schema.models.organizations.Quantifi attribute) (aind_data_schema.models.organizations.RaspberryPi attribute) (aind_data_schema.models.organizations.SchneiderKreuznach attribute) (aind_data_schema.models.organizations.SecondOrderEffects attribute) (aind_data_schema.models.organizations.Semrock attribute) (aind_data_schema.models.organizations.SigmaAldritch attribute) (aind_data_schema.models.organizations.SimonsFoundation attribute) (aind_data_schema.models.organizations.Spinnaker attribute) (aind_data_schema.models.organizations.Tamron attribute) (aind_data_schema.models.organizations.TeledyneFLIR attribute) (aind_data_schema.models.organizations.TheImagingSource attribute) (aind_data_schema.models.organizations.TheLeeCompany attribute) (aind_data_schema.models.organizations.Thermofisher attribute) (aind_data_schema.models.organizations.Thorlabs attribute) (aind_data_schema.models.organizations.TMC attribute) (aind_data_schema.models.organizations.Tymphany attribute) (aind_data_schema.models.organizations.Vieworks attribute) (aind_data_schema.models.organizations.Vortran attribute) (aind_data_schema.models.pid_names.PIDName attribute) (aind_data_schema.models.species.CallithrixJacchus attribute) (aind_data_schema.models.species.HomoSapiens attribute) (aind_data_schema.models.species.MacacaMulatta attribute) (aind_data_schema.models.species.MusMusculus attribute) (aind_data_schema.models.species.RattusNorvegicus attribute) related_data (aind_data_schema.core.data_description.DataDescription attribute) related_data_path (aind_data_schema.core.data_description.RelatedData attribute) relation (aind_data_schema.core.data_description.RelatedData attribute) REMOTE (aind_data_schema.models.devices.ObjectiveType attribute) repetition_time (aind_data_schema.core.mri_session.MRIScan attribute) repetition_time_unit (aind_data_schema.core.mri_session.MRIScan attribute) report (aind_data_schema.core.subject.WellnessReport attribute) RESEARCH_INSTITUTIONS (aind_data_schema.models.organizations.Organization attribute) restrictions (aind_data_schema.core.data_description.DataDescription attribute) (aind_data_schema.core.subject.Subject attribute) reward_consumed_during_epoch (aind_data_schema.core.session.StimulusEpoch attribute) reward_consumed_total (aind_data_schema.core.session.Session attribute) reward_consumed_unit (aind_data_schema.core.session.Session attribute) (aind_data_schema.core.session.StimulusEpoch attribute) reward_delivery (aind_data_schema.core.session.Session attribute) reward_solution (aind_data_schema.core.session.RewardDeliveryConfig attribute) reward_spouts (aind_data_schema.core.session.RewardDeliveryConfig attribute) (aind_data_schema.models.devices.RewardDelivery attribute) RewardSolution (class in aind_data_schema.core.session) rig (aind_data_schema.core.metadata.Metadata attribute) rig_axes (aind_data_schema.core.rig.Rig attribute) rig_id (aind_data_schema.core.rig.Rig attribute) (aind_data_schema.core.session.Session attribute) RIGHT (aind_data_schema.core.procedures.Side attribute) (aind_data_schema.models.devices.SpoutSide attribute) RL (aind_data_schema.models.coordinates.AnatomicalDirection attribute) RNA (aind_data_schema.core.procedures.StainType attribute) roll (aind_data_schema.models.coordinates.Orientation3d attribute) room_id (aind_data_schema.core.subject.Housing attribute) ROR (aind_data_schema.models.registry.Registry attribute) rotation (aind_data_schema.models.coordinates.Rotation3dTransform attribute) rotation_angle (aind_data_schema.core.session.DomeModule attribute) (aind_data_schema.models.coordinates.ModuleOrientation3d attribute) ROTATION_MOUNT (aind_data_schema.models.devices.ImagingDeviceType attribute) round_index (aind_data_schema.core.procedures.HybridizationChainReaction attribute) RPM (aind_data_schema.models.units.SpeedUnit attribute) rrid (aind_data_schema.core.subject.Subject attribute) (aind_data_schema.models.reagent.Reagent attribute) RRID (aind_data_schema.models.registry.Registry attribute) run_job() (aind_data_schema.utils.schema_version_bump.SchemaVersionHandler method) RUNNING_WHEEL (aind_data_schema.core.subject.HomeCageEnrichment attribute) S S (aind_data_schema.models.units.TimeUnit attribute) SAGITTAL (aind_data_schema.core.procedures.SectionOrientation attribute) SAMPLE_CHAMBER (aind_data_schema.models.devices.ImagingDeviceType attribute) sample_frequency (aind_data_schema.models.stimulus.AuditoryStimulation attribute) sample_immersion (aind_data_schema.core.acquisition.Acquisition attribute) sample_rate (aind_data_schema.models.devices.DAQChannel attribute) sample_rate_unit (aind_data_schema.models.devices.DAQChannel attribute) save_all_core_model_diagrams() (in module aind_data_schema.utils.diagrams) save_diagram() (in module aind_data_schema.utils.diagrams) scale (aind_data_schema.models.coordinates.Scale3dTransform attribute) SCAN_3D (aind_data_schema.core.mri_session.ScanType attribute) scan_index (aind_data_schema.core.mri_session.MRIScan attribute) scan_sequence_type (aind_data_schema.core.mri_session.MRIScan attribute) scan_type (aind_data_schema.core.mri_session.MRIScan attribute) scanfield_z (aind_data_schema.core.session.FieldOfView attribute) scanfield_z_unit (aind_data_schema.core.session.FieldOfView attribute) scanimage_roi_index (aind_data_schema.core.session.FieldOfView attribute) scanner_location (aind_data_schema.models.devices.Scanner attribute) ScannerLocation (class in aind_data_schema.models.devices) scanning_stages (aind_data_schema.core.instrument.Instrument attribute) scans (aind_data_schema.core.mri_session.MriSession attribute) ScanType (class in aind_data_schema.core.mri_session) schema_version (aind_data_schema.base.AindCoreModel attribute) (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.data_description.DataDescription attribute) (aind_data_schema.core.instrument.Instrument attribute) (aind_data_schema.core.metadata.Metadata attribute) (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.Procedures attribute) (aind_data_schema.core.processing.Processing attribute) (aind_data_schema.core.rig.Rig attribute) (aind_data_schema.core.session.Session attribute) (aind_data_schema.core.subject.Subject attribute) SchemaVersionHandler (class in aind_data_schema.utils.schema_version_bump) SchemaWriter (class in aind_data_schema.utils.json_writer) SCHNEIDER_KREUZNACH (aind_data_schema.models.organizations.Organization attribute) script (aind_data_schema.core.session.StimulusEpoch attribute) SECONDARY (aind_data_schema.core.procedures.ImmunolabelClass attribute) section_distance_from_reference (aind_data_schema.core.procedures.Sectioning attribute) section_distance_unit (aind_data_schema.core.procedures.Sectioning attribute) section_orientation (aind_data_schema.core.procedures.Sectioning attribute) section_strategy (aind_data_schema.core.procedures.Sectioning attribute) section_thickness (aind_data_schema.core.procedures.Sectioning attribute) section_thickness_unit (aind_data_schema.core.procedures.Sectioning attribute) sectioning (aind_data_schema.core.procedures.SpecimenProcedure attribute) SECTIONING (aind_data_schema.core.procedures.SpecimenProcedureType attribute) SectionOrientation (class in aind_data_schema.core.procedures) SectionStrategy (class in aind_data_schema.core.procedures) SEMROCK (aind_data_schema.models.organizations.Organization attribute) sensor_format (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) sensor_format_unit (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) sensor_height (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) sensor_width (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) serial_number (aind_data_schema.models.devices.Device attribute) session (aind_data_schema.core.metadata.Metadata attribute) session_end_time (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.session.Session attribute) session_number (aind_data_schema.core.session.StimulusEpoch attribute) session_start_time (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.session.Session attribute) session_type (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.session.Session attribute) (aind_data_schema.core.session.SlapFieldOfView attribute) SETUP (aind_data_schema.core.mri_session.ScanType attribute) sex (aind_data_schema.core.subject.Subject attribute) Sex (class in aind_data_schema.core.subject) SHORTPASS (aind_data_schema.models.devices.FilterType attribute) SI (aind_data_schema.models.coordinates.AnatomicalDirection attribute) side (aind_data_schema.core.session.RewardSpoutConfig attribute) SIDE (aind_data_schema.models.devices.CameraTarget attribute) side (aind_data_schema.models.devices.RewardSpout attribute) Side (class in aind_data_schema.core.procedures) SIGMA (aind_data_schema.models.organizations.Organization attribute) SILVER (aind_data_schema.core.procedures.GroundWireMaterial attribute) SIMONS (aind_data_schema.models.organizations.Organization attribute) SINE (aind_data_schema.models.stimulus.PulseShape attribute) SINGLE_PLANE_OPHYS (aind_data_schema.models.platforms.Platform attribute) sitmulus_name (aind_data_schema.models.stimulus.AuditoryStimulation attribute) size (aind_data_schema.models.devices.Enclosure attribute) (aind_data_schema.models.devices.Lens attribute) size_unit (aind_data_schema.models.devices.Camera attribute) (aind_data_schema.models.devices.Detector attribute) (aind_data_schema.models.devices.Filter attribute) (aind_data_schema.models.devices.Monitor attribute) (aind_data_schema.models.devices.Wheel attribute) SizeUnit (class in aind_data_schema.models.units) SKULL_STRIPPING (aind_data_schema.models.process_names.ProcessName attribute) SLAP (aind_data_schema.models.modalities.Modality attribute) SLAP2 (aind_data_schema.models.platforms.Platform attribute) slap_fovs (aind_data_schema.core.session.Stream attribute) SlapSessionType (class in aind_data_schema.core.session) SLIT (aind_data_schema.models.devices.ImagingDeviceType attribute) slot (aind_data_schema.models.devices.NeuropixelsBasestation attribute) SMARTSPIM (aind_data_schema.models.devices.ImagingInstrumentType attribute) (aind_data_schema.models.platforms.Platform attribute) SMF (aind_data_schema.models.devices.Coupling attribute) SNIFF_DETECTOR (aind_data_schema.models.harp_types.HarpDeviceType attribute) SOAK (aind_data_schema.core.procedures.SpecimenProcedureType attribute) software (aind_data_schema.core.session.StimulusEpoch attribute) software_version (aind_data_schema.core.processing.DataProcess attribute) solenoid_valve (aind_data_schema.models.devices.RewardSpout attribute) SORTA_CLEAR (aind_data_schema.core.procedures.ProtectiveMaterial attribute) SOUND_CARD (aind_data_schema.models.harp_types.HarpDeviceType attribute) SoundIntensityUnit (class in aind_data_schema.models.units) source (aind_data_schema.core.subject.Subject attribute) (aind_data_schema.models.reagent.Reagent attribute) SPATIAL_TIMESERIES_DEMIXING (aind_data_schema.models.process_names.ProcessName attribute) speaker_config (aind_data_schema.core.session.StimulusEpoch attribute) SPEAKER_MANUFACTURERS (aind_data_schema.models.organizations.Organization attribute) species (aind_data_schema.core.procedures.OligoProbe attribute) (aind_data_schema.core.subject.Subject attribute) Species (class in aind_data_schema.models.species) specimen_id (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.procedures.SpecimenProcedure attribute) specimen_procedures (aind_data_schema.core.procedures.Procedures attribute) SpecimenProcedureType (class in aind_data_schema.core.procedures) speed (aind_data_schema.models.devices.PolygonalScanner attribute) speed_unit (aind_data_schema.models.devices.PolygonalScanner attribute) SpeedUnit (class in aind_data_schema.models.units) SPIKE_SORTING (aind_data_schema.models.process_names.ProcessName attribute) SPIM (aind_data_schema.models.modalities.Modality attribute) SPINNAKER (aind_data_schema.models.organizations.Organization attribute) spiral_duration (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) spiral_duration_unit (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) spout_diameter (aind_data_schema.models.devices.RewardSpout attribute) spout_diameter_unit (aind_data_schema.models.devices.RewardSpout attribute) spout_position (aind_data_schema.models.devices.RewardSpout attribute) SpoutSide (class in aind_data_schema.models.devices) SQUARE (aind_data_schema.models.stimulus.PulseShape attribute) stack_parameters (aind_data_schema.core.session.Stream attribute) stage_axis_direction (aind_data_schema.models.devices.ScanningStage attribute) stage_axis_name (aind_data_schema.models.devices.ScanningStage attribute) stage_type (aind_data_schema.models.devices.RewardDelivery attribute) StageAxisDirection (class in aind_data_schema.models.devices) StageAxisName (class in aind_data_schema.models.devices) stain_type (aind_data_schema.core.procedures.Readout attribute) (aind_data_schema.core.procedures.Stain attribute) STAINLESS_STEEL (aind_data_schema.models.devices.FerruleMaterial attribute) StainType (class in aind_data_schema.core.procedures) start_date (aind_data_schema.core.procedures.SpecimenProcedure attribute) (aind_data_schema.core.procedures.Surgery attribute) (aind_data_schema.core.procedures.TrainingProtocol attribute) (aind_data_schema.core.procedures.WaterRestriction attribute) start_date_time (aind_data_schema.core.processing.DataProcess attribute) start_depth (aind_data_schema.core.session.StackChannel attribute) start_phase (aind_data_schema.models.devices.DigitalMicromirrorDevice attribute) start_time (aind_data_schema.core.procedures.HybridizationChainReaction attribute) starting_position (aind_data_schema.core.session.RewardSpoutConfig attribute) STEEL (aind_data_schema.core.procedures.HeadframeMaterial attribute) step_size (aind_data_schema.core.session.Stack attribute) step_size_unit (aind_data_schema.core.session.Stack attribute) STEPPER_DRIVER (aind_data_schema.models.harp_types.HarpDeviceType attribute) stereotactic_coordinate_ap (aind_data_schema.core.procedures.OphysProbe attribute) stereotactic_coordinate_dv (aind_data_schema.core.procedures.OphysProbe attribute) stereotactic_coordinate_ml (aind_data_schema.core.procedures.OphysProbe attribute) stereotactic_coordinate_reference (aind_data_schema.core.procedures.OphysProbe attribute) stereotactic_coordinate_unit (aind_data_schema.core.procedures.OphysProbe attribute) stick_microscopes (aind_data_schema.core.rig.Rig attribute) (aind_data_schema.core.session.Stream attribute) stimulation_laser_power (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) stimulation_laser_power_unit (aind_data_schema.models.stimulus.PhotoStimulationGroup attribute) stimulus_device_names (aind_data_schema.core.session.StimulusEpoch attribute) stimulus_devices (aind_data_schema.core.rig.Rig attribute) stimulus_end_time (aind_data_schema.core.session.StimulusEpoch attribute) stimulus_epochs (aind_data_schema.core.session.Session attribute) stimulus_modalities (aind_data_schema.core.session.StimulusEpoch attribute) stimulus_name (aind_data_schema.core.session.StimulusEpoch attribute) (aind_data_schema.models.stimulus.OlfactoryStimulation attribute) (aind_data_schema.models.stimulus.OptoStimulation attribute) (aind_data_schema.models.stimulus.PhotoStimulation attribute) (aind_data_schema.models.stimulus.VisualStimulation attribute) stimulus_parameters (aind_data_schema.core.session.StimulusEpoch attribute) (aind_data_schema.models.stimulus.VisualStimulation attribute) stimulus_start_time (aind_data_schema.core.session.StimulusEpoch attribute) stimulus_template_name (aind_data_schema.models.stimulus.VisualStimulation attribute) stimulus_type (aind_data_schema.models.stimulus.AuditoryStimulation attribute) (aind_data_schema.models.stimulus.OlfactoryStimulation attribute) (aind_data_schema.models.stimulus.OptoStimulation attribute) (aind_data_schema.models.stimulus.PhotoStimulation attribute) (aind_data_schema.models.stimulus.VisualStimulation attribute) StimulusModality (class in aind_data_schema.core.session) STORAGE (aind_data_schema.core.procedures.SpecimenProcedureType attribute) stream_end_time (aind_data_schema.core.session.Stream attribute) stream_modalities (aind_data_schema.core.session.Stream attribute) stream_start_time (aind_data_schema.core.session.Stream attribute) strip_qc_compatible (aind_data_schema.core.procedures.HCRSeries attribute) STRIPPING (aind_data_schema.core.procedures.SpecimenProcedureType attribute) subject (aind_data_schema.core.metadata.Metadata attribute) subject_id (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.data_description.DataDescription attribute) (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.Procedures attribute) (aind_data_schema.core.session.Session attribute) (aind_data_schema.core.subject.Subject attribute) subject_position (aind_data_schema.core.mri_session.MRIScan attribute) subject_procedures (aind_data_schema.core.procedures.Procedures attribute) SUBJECT_SOURCES (aind_data_schema.models.organizations.Organization attribute) SubjectPosition (class in aind_data_schema.core.mri_session) SUPINE (aind_data_schema.core.mri_session.SubjectPosition attribute) surface_material (aind_data_schema.models.devices.MousePlatform attribute) SYNCHRONIZER (aind_data_schema.models.harp_types.HarpDeviceType attribute) T table_size_unit (aind_data_schema.models.devices.OpticalTable attribute) tag_version (aind_data_schema.models.devices.HarpDevice attribute) TAMRON (aind_data_schema.models.organizations.Organization attribute) target_branch (aind_data_schema.core.session.SlapFieldOfView attribute) target_fraction_weight (aind_data_schema.core.procedures.WaterRestriction attribute) target_fraction_weight_unit (aind_data_schema.core.procedures.WaterRestriction attribute) target_neuron (aind_data_schema.core.session.SlapFieldOfView attribute) targeted_ccf_coordinates (aind_data_schema.core.session.ManipulatorModule attribute) targeted_structure (aind_data_schema.core.procedures.BrainInjection attribute) (aind_data_schema.core.procedures.OphysProbe attribute) (aind_data_schema.core.procedures.Sectioning attribute) (aind_data_schema.core.session.FieldOfView attribute) (aind_data_schema.core.session.Stack attribute) tars_identifiers (aind_data_schema.core.procedures.ViralMaterial attribute) temperature (aind_data_schema.models.devices.Lamp attribute) temperature_control (aind_data_schema.core.instrument.Instrument attribute) temperature_unit (aind_data_schema.models.devices.Lamp attribute) TemperatureUnit (class in aind_data_schema.models.units) THERMOFISHER (aind_data_schema.models.organizations.Organization attribute) thickness (aind_data_schema.models.devices.Filter attribute) thickness_unit (aind_data_schema.models.devices.Filter attribute) THORLABS (aind_data_schema.models.organizations.Organization attribute) THREE_MM (aind_data_schema.core.procedures.CraniotomyType attribute) tiles (aind_data_schema.core.acquisition.Acquisition attribute) (aind_data_schema.core.processing.Registration attribute) TIME (aind_data_schema.core.data_description.RegexParts attribute) time_setting_unit (aind_data_schema.models.devices.PockelsCell attribute) TIMESTAMP_GENERATOR_1 (aind_data_schema.models.harp_types.HarpDeviceType attribute) TIMESTAMP_GENERATOR_3 (aind_data_schema.models.harp_types.HarpDeviceType attribute) TimeUnit (class in aind_data_schema.models.units) TITANIUM (aind_data_schema.core.procedures.HeadframeMaterial attribute) titer (aind_data_schema.core.procedures.ViralMaterial attribute) titer_unit (aind_data_schema.core.procedures.ViralMaterial attribute) TMC (aind_data_schema.models.organizations.Organization attribute) TONGUE (aind_data_schema.models.devices.CameraTarget attribute) torque_output (aind_data_schema.models.devices.Wheel attribute) torque_sensor (aind_data_schema.models.devices.Wheel attribute) total_length (aind_data_schema.models.devices.FiberProbe attribute) training_name (aind_data_schema.core.procedures.TrainingProtocol attribute) translation (aind_data_schema.models.coordinates.Translation3dTransform attribute) TRANSVERSE (aind_data_schema.core.procedures.SectionOrientation attribute) travel (aind_data_schema.models.devices.MotorizedStage attribute) travel_unit (aind_data_schema.models.devices.MotorizedStage attribute) TREADMILL (aind_data_schema.models.harp_types.HarpDeviceType attribute) treadmill_width (aind_data_schema.models.devices.Treadmill attribute) trials_finished (aind_data_schema.core.session.StimulusEpoch attribute) trials_rewarded (aind_data_schema.core.session.StimulusEpoch attribute) trials_total (aind_data_schema.core.session.StimulusEpoch attribute) trigger_type (aind_data_schema.core.session.DetectorConfig attribute) TriggerType (class in aind_data_schema.core.session) TUNABLE_LENS (aind_data_schema.models.devices.ImagingDeviceType attribute) TWO_PHOTON (aind_data_schema.models.devices.ImagingInstrumentType attribute) TYMPHANY (aind_data_schema.models.organizations.Organization attribute) type (aind_data_schema.core.procedures.Anaesthetic attribute) (aind_data_schema.models.coordinates.Affine3dTransform attribute) (aind_data_schema.models.coordinates.CoordinateTransform attribute) (aind_data_schema.models.coordinates.Rotation3dTransform attribute) (aind_data_schema.models.coordinates.Scale3dTransform attribute) (aind_data_schema.models.coordinates.Translation3dTransform attribute) U UA (aind_data_schema.models.units.CurrentUnit attribute) UG (aind_data_schema.models.units.MassUnit attribute) UL (aind_data_schema.models.units.VolumeUnit attribute) UM (aind_data_schema.models.units.ConcentrationUnit attribute) (aind_data_schema.models.units.SizeUnit attribute) unit (aind_data_schema.models.coordinates.CcfCoords attribute) (aind_data_schema.models.coordinates.Coordinates3d attribute) (aind_data_schema.models.coordinates.ImageAxis attribute) (aind_data_schema.models.coordinates.ModuleOrientation2d attribute) (aind_data_schema.models.coordinates.ModuleOrientation3d attribute) (aind_data_schema.models.coordinates.Orientation3d attribute) (aind_data_schema.models.coordinates.Size2d attribute) (aind_data_schema.models.coordinates.Size3d attribute) (aind_data_schema.models.units.AngleValue attribute) (aind_data_schema.models.units.FrequencyValue attribute) (aind_data_schema.models.units.MassValue attribute) (aind_data_schema.models.units.PowerValue attribute) (aind_data_schema.models.units.SizeValue attribute) (aind_data_schema.models.units.TimeValue attribute) (aind_data_schema.models.units.VolumeValue attribute) UnitlessUnit (class in aind_data_schema.models.units) UNKNOWN (aind_data_schema.core.metadata.MetadataStatus attribute) url (aind_data_schema.models.devices.Software attribute) US (aind_data_schema.models.units.TimeUnit attribute) USB (aind_data_schema.models.devices.DataInterface attribute) UW (aind_data_schema.models.units.PowerUnit attribute) UW_SLU (aind_data_schema.models.devices.ScannerLocation attribute) V VALID (aind_data_schema.core.metadata.MetadataStatus attribute) validate_cameras_other() (aind_data_schema.core.rig.Rig method) validate_core_fields() (aind_data_schema.core.metadata.Metadata class method) validate_device_names() (aind_data_schema.core.instrument.Instrument class method) (aind_data_schema.core.rig.Rig class method) validate_ecephys_metadata() (aind_data_schema.core.metadata.Metadata method) validate_genotype() (aind_data_schema.core.subject.Subject class method) validate_inhouse_breeding_info() (aind_data_schema.core.subject.Subject class method) validate_metadata() (aind_data_schema.core.metadata.Metadata method) validate_modalities() (aind_data_schema.core.rig.Rig class method) validate_other() (aind_data_schema.core.instrument.Instrument class method) (aind_data_schema.core.mri_session.MRIScan class method) (aind_data_schema.core.processing.DataProcess class method) (aind_data_schema.core.session.RewardDeliveryConfig class method) (aind_data_schema.models.devices.AdditionalImagingDevice class method) (aind_data_schema.models.devices.Detector method) (aind_data_schema.models.devices.HarpDevice class method) (aind_data_schema.models.devices.Objective class method) (aind_data_schema.models.devices.RewardSpout method) validate_primary_scan() (aind_data_schema.core.mri_session.MRIScan method) validate_procedure_type() (aind_data_schema.core.procedures.SpecimenProcedure method) validate_smartspim_metadata() (aind_data_schema.core.metadata.Metadata method) validate_stream_modalities() (aind_data_schema.core.session.Stream class method) value (aind_data_schema.models.units.AngleValue attribute) (aind_data_schema.models.units.FrequencyValue attribute) (aind_data_schema.models.units.MassValue attribute) (aind_data_schema.models.units.PowerValue attribute) (aind_data_schema.models.units.SizeValue attribute) (aind_data_schema.models.units.TimeValue attribute) (aind_data_schema.models.units.VolumeValue attribute) variable_position (aind_data_schema.core.session.RewardSpoutConfig attribute) vc_orientation (aind_data_schema.core.mri_session.MRIScan attribute) vc_position (aind_data_schema.core.mri_session.MRIScan attribute) version (aind_data_schema.models.devices.Software attribute) vibration_control (aind_data_schema.models.devices.OpticalTable attribute) VIDEO_MOTION_CORRECTION (aind_data_schema.models.process_names.ProcessName attribute) VIDEO_PLANE_DECROSSTALK (aind_data_schema.models.process_names.ProcessName attribute) VIDEO_ROI_CLASSIFICATION (aind_data_schema.models.process_names.ProcessName attribute) VIDEO_ROI_SEGMENTATION (aind_data_schema.models.process_names.ProcessName attribute) VIDEO_ROI_TIMESERIES_EXTRACTION (aind_data_schema.models.process_names.ProcessName attribute) viewing_distance (aind_data_schema.models.devices.Monitor attribute) viewing_distance_unit (aind_data_schema.models.devices.Monitor attribute) VIEWORKS (aind_data_schema.models.organizations.Organization attribute) VIMBA (aind_data_schema.models.devices.DeviceDriver attribute) VIRTUAL_REALITY (aind_data_schema.core.session.StimulusModality attribute) virus_tars_id (aind_data_schema.core.procedures.TarsVirusIdentifiers attribute) VirusPrepType (class in aind_data_schema.core.procedures) VISCTX (aind_data_schema.core.procedures.CraniotomyType attribute) VISUAL (aind_data_schema.core.session.StimulusModality attribute) volume (aind_data_schema.core.session.SpeakerConfig attribute) VOLUME_PERCENT (aind_data_schema.models.units.ConcentrationUnit attribute) volume_unit (aind_data_schema.core.session.SpeakerConfig attribute) VolumeUnit (class in aind_data_schema.models.units) VORTRAN (aind_data_schema.models.organizations.Organization attribute) voxel_sizes (aind_data_schema.core.mri_session.MRIScan attribute) W WATER (aind_data_schema.core.session.RewardSolution attribute) (aind_data_schema.models.devices.Cooling attribute) (aind_data_schema.models.devices.ImmersionMedium attribute) wavelength (aind_data_schema.core.session.LaserConfig attribute) (aind_data_schema.models.devices.Laser attribute) (aind_data_schema.models.devices.LightEmittingDiode attribute) wavelength_max (aind_data_schema.models.devices.Lamp attribute) wavelength_min (aind_data_schema.models.devices.Lamp attribute) wavelength_unit (aind_data_schema.core.session.LaserConfig attribute) (aind_data_schema.models.devices.Filter attribute) (aind_data_schema.models.devices.Lamp attribute) (aind_data_schema.models.devices.Laser attribute) (aind_data_schema.models.devices.Lens attribute) (aind_data_schema.models.devices.LightEmittingDiode attribute) weight_unit (aind_data_schema.core.mri_session.MriSession attribute) (aind_data_schema.core.procedures.Surgery attribute) (aind_data_schema.core.procedures.WaterRestriction attribute) (aind_data_schema.core.session.Session attribute) well_part_number (aind_data_schema.core.procedures.Headframe attribute) (aind_data_schema.core.procedures.ProtectiveMaterialReplacement attribute) well_type (aind_data_schema.core.procedures.Headframe attribute) (aind_data_schema.core.procedures.ProtectiveMaterialReplacement attribute) wellness_reports (aind_data_schema.core.subject.Subject attribute) WHC (aind_data_schema.core.procedures.CraniotomyType attribute) WHEEL_FRICTION (aind_data_schema.core.session.StimulusModality attribute) WHITE_ZIRCONIA (aind_data_schema.core.procedures.HeadframeMaterial attribute) whoami (aind_data_schema.models.harp_types.Behavior attribute) (aind_data_schema.models.harp_types.CameraController attribute) (aind_data_schema.models.harp_types.ClockSynchronizer attribute) (aind_data_schema.models.harp_types.Cuttlefish attribute) (aind_data_schema.models.harp_types.GenericHarpDevice attribute) (aind_data_schema.models.harp_types.InputExpander attribute) (aind_data_schema.models.harp_types.LicketySplit attribute) (aind_data_schema.models.harp_types.LoadCells attribute) (aind_data_schema.models.harp_types.Olfactometer attribute) (aind_data_schema.models.harp_types.SniffDetector attribute) (aind_data_schema.models.harp_types.SoundCard attribute) (aind_data_schema.models.harp_types.StepperDriver attribute) (aind_data_schema.models.harp_types.Synchronizer attribute) (aind_data_schema.models.harp_types.TimestampGeneratorGen1 attribute) (aind_data_schema.models.harp_types.TimestampGeneratorGen3 attribute) (aind_data_schema.models.harp_types.Treadmill attribute) WHOLE (aind_data_schema.core.procedures.SectionStrategy attribute) width (aind_data_schema.models.coordinates.Size2d attribute) (aind_data_schema.models.coordinates.Size3d attribute) (aind_data_schema.models.devices.Filter attribute) (aind_data_schema.models.devices.Monitor attribute) (aind_data_schema.models.devices.OpticalTable attribute) (aind_data_schema.models.devices.Wheel attribute) width_unit (aind_data_schema.models.devices.Treadmill attribute) workstation_id (aind_data_schema.core.procedures.Surgery attribute) write_standard_file() (aind_data_schema.base.AindCoreModel method) write_to_json() (aind_data_schema.utils.json_writer.SchemaWriter method) X X (aind_data_schema.models.coordinates.AxisName attribute) x (aind_data_schema.models.coordinates.Coordinates3d attribute) X (aind_data_schema.models.devices.StageAxisName attribute) Y Y (aind_data_schema.models.coordinates.AxisName attribute) y (aind_data_schema.models.coordinates.Coordinates3d attribute) Y (aind_data_schema.models.devices.StageAxisName attribute) yaw (aind_data_schema.models.coordinates.Orientation3d attribute) Z Z (aind_data_schema.models.coordinates.AxisName attribute) z (aind_data_schema.models.coordinates.Coordinates3d attribute) Z (aind_data_schema.models.devices.StageAxisName attribute) ZEISS (aind_data_schema.models.organizations.Organization attribute)