# Modalities

## Model definitions

### Modality

Modalities

| Name | name | abbreviation |
|------|------|------|
| `BARSEQ` | `Barcoded anatomy resolved by sequencing` | `BARseq` |
| `BEHAVIOR` | `Behavior` | `behavior` |
| `BEHAVIOR_VIDEOS` | `Behavior videos` | `behavior-videos` |
| `BRIGHTFIELD` | `Brightfield microscopy` | `brightfield` |
| `CONFOCAL` | `Confocal microscopy` | `confocal` |
| `ECEPHYS` | `Extracellular electrophysiology` | `ecephys` |
| `EM` | `Electron microscopy` | `EM` |
| `EMG` | `Electromyography` | `EMG` |
| `FIB` | `Fiber photometry` | `fib` |
| `FMOST` | `Fluorescence micro-optical sectioning tomography` | `fMOST` |
| `ICEPHYS` | `Intracellular electrophysiology` | `icephys` |
| `ISI` | `Intrinsic signal imaging` | `ISI` |
| `MAPSEQ` | `Multiplexed analysis of projections by sequencing` | `MAPseq` |
| `MERFISH` | `Multiplexed error-robust fluorescence in situ hybridization` | `merfish` |
| `MRI` | `Magnetic resonance imaging` | `MRI` |
| `POPHYS` | `Planar optical physiology` | `pophys` |
| `SCRNASEQ` | `Single cell RNA sequencing` | `scRNAseq` |
| `SLAP2` | `Random access projection microscopy` | `slap2` |
| `SPIM` | `Selective plane illumination microscopy` | `SPIM` |
| `STPT` | `Serial two-photon tomogrophy` | `STPT` |